Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0788 ATGCAGCATTTCCGGCCAGAATCTCTGGCATCATTCGCGGCGGCGCTTCTCTTATTCGCCGCCGCCACCACAACCACCACTCACGCCCACAACATCACTCACATTCTCACCAAGTACCCAGAATACTCCACCTTCAACCACTACCTAACCCTTACCCACCTAGCATCGGAGATCAACCAACGCACCACCATCACCGTCTGCGCCGTAGACAACGCCGCCATGAGCGACCTCCTCTCAAAGCACCCATCCATCTACACCGTCAAAAACATCCTCTCCCTCCACGTCCTCCTCGACTACTTCGGCGCCAAAAAGCTCCACCAAATCACCAACGGCACCGCCCTCGCCGCCACCATGTTCCAAGCCACCGGTACCGCTCCTGGATCCTCCGGATTCGTTAACATCACTGACCTCCGCGGCGGAAAAGTCGGATTCGGCGCCGACAGTAACAACAACGCCGATAACGACGGCGCTCCACTCACCGCGTTCTTCGTTAAATCCGTTGAGGAAATCCCTTACAATATTTCAGTACTCCAAATTAGTAAAGTTCTTCCCTCGGTTGTAGCGGAAGCTCCTACACCCGCACCCAGCCAACAAAACCTCACTTCCATTATGTCAAAACACGGTTGCAAAGTCTTCGCTGATACGTTGGTAACATCTTCTGAAGCTATAAACACTTTTTCCGATAACGTTGAAGGAGGATTAACCGTTTTCTGCCCTATCGATGACGCGTTTAAAGCGTTTTTACCTAAATTCAAGAACCTCACGGTAACCGGAAAAGCTTCACTTCTCGAATATCACGGTATTCCGGTTTATCAATCCCTCGCGATGCTTAAGTCAAATAACGGAATCTTGAACACGCTCGCCACTGACGGCGGCAATAAGTATGATTTGACGGTGCAGAATGACGGGGAAAAGGTGACTTTGAGGACTAAGATTGACACGGCGAAGATCACCGGCACGCTCATTGATGAGCAGCCGCTGGCGATCTACACCGTGGATAAGGTTTTGCTTCCTCGGGAGCTTTTTAAGGCTGATGCTCCTGTTCCGGCGCCTTCTCCGGCGCCGGAGCCTGCTGCGGCTGATGCGCCTGCTCCGCCGAAGAAGCATAAGAAGAAGAAGGCGGCTGATGCGCCGGCAGATTTGGATTCTGATTCACCTGCTGATTCACCGGATGATGCCGCAGATCAGAGCGCCGATGACAACAGCGGTGGATTTAGGTTTGGCAATGAGAGGTATATTAATGTTGCTATGGTTGTTGTGTGTTTGGTTTTTGGTTTTCAAATGGTTTGA 1290 0.5155 MQHFRPESLASFAAALLLFAAATTTTTHAHNITHILTKYPEYSTFNHYLTLTHLASEINQRTTITVCAVDNAAMSDLLSKHPSIYTVKNILSLHVLLDYFGAKKLHQITNGTALAATMFQATGTAPGSSGFVNITDLRGGKVGFGADSNNNADNDGAPLTAFFVKSVEEIPYNISVLQISKVLPSVVAEAPTPAPSQQNLTSIMSKHGCKVFADTLVTSSEAINTFSDNVEGGLTVFCPIDDAFKAFLPKFKNLTVTGKASLLEYHGIPVYQSLAMLKSNNGILNTLATDGGNKYDLTVQNDGEKVTLRTKIDTAKITGTLIDEQPLAIYTVDKVLLPRELFKADAPVPAPSPAPEPAAADAPAPPKKHKKKKAADAPADLDSDSPADSPDDAADQSADDNSGGFRFGNERYINVAMVVVCLVFGFQMV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0788 429 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 13 414 - -
Lal3g0788 429 MobiDBLite consensus disorder prediction 348 362 - -
Lal3g0788 429 SUPERFAMILY FAS1 domain 35 183 IPR036378 -
Lal3g0788 429 ProSiteProfiles FAS1/BIgH3 domain profile. 196 336 IPR000782 -
Lal3g0788 429 SUPERFAMILY FAS1 domain 192 339 IPR036378 -
Lal3g0788 429 Pfam Fasciclin domain 41 110 IPR000782 -
Lal3g0788 429 Pfam Fasciclin domain 215 338 IPR000782 -
Lal3g0788 429 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 414 IPR033254 -
Lal3g0788 429 SMART fasc_3 235 339 IPR000782 -
Lal3g0788 429 MobiDBLite consensus disorder prediction 347 403 - -
Lal3g0788 429 Gene3D FAS1 domain 185 339 IPR036378 -
Lal3g0788 429 ProSiteProfiles FAS1/BIgH3 domain profile. 29 183 IPR000782 -
Lal3g0788 429 Gene3D FAS1 domain 28 184 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0788 Lal-Chr3 7127038 7128327 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0788 - - lang:109350304 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0788 3 7127038 7128327 Lal3g0788 3 7127038 7128327 ECH