Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0783 ATGAAGACACAGAAACTCCCTACCTTGGCACTCTCACGTGCTCTATCACGTGCTCTAAGCTCCTCCACCACCTCCGCCGCATCGGAATCTGGACCAGCGTTCCCTGTGAAGACAGTAACCACCGCCAACTTCGAAGCCACTTTGTCGGAGCTCCGTCACCATGTAAGAGCCTCAGACTTCGTGGCCATTGATCTCGAAATGACCGGCGTCACCAGTACCCCGTGGCGCGAGTCGTTCGCGTTCGACCGGTCCGATGTACGGTACCTCAAAGTCAGAGACTCCGCACAGAAGTTCGCCGTCGTCCAATTCGGCGTCTGTCCCTTCCGATGGGACCCATCAAATCGCTCCTTCATCGCTTATCCGCACAATTTCTACATTTTTCCACGTCAGGAGCATGCGGGTTTGGGTCCATCTTTTGAATTTCTCTGCCAGACTACTTCCATTGATTTCTTGGCTAAATACCAGTTTGACTTTAATGCATGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAAGGAAGCAATGGCAAGTTTGAATTCTACATATGCTAGTGAGTGGTCAGATGTCTATAAACTAAAAAATTCTAGAGACATACCATTGGTCAGCATGGCAGATATTTTGTTTACTGAACGAATGAAAAACAGATTCAGTAAATGGCGTGATGGGTTATTACAAGAGAAATATCAAGAAAACCAAACTCAAGGAATCTCAGAAGACTCCAAACAACAACTTCAAGTATTTTTCTTTAAGATGCACCCAGCTCTTAGACTTAATGGATTCACCTCTCATCAACTTAAACTGATTCAGTTGGTTATCAGAAAGCACTTCAAAGATCTTTCTTATGTCTGTGTGAACAGCGAGGATTCTGATATACAACAAATAGTTGTATATACAGACTCAAAAGATGAACTGAACTTACTTCTGAAGGAGGTTAAAGAGGAAAATTGCAGGGCAGCAGAGATGAAGATCCAAGCTGCTGTGGGATTTCGTCATGTTATTGATCTCCTTTCTGCAGAACAAAAGTTGATAGTTGGTCACAATTGTTTTCTGGATATTTCTCATGTCTACAGCAAGTTTATAGGCCCTCTTCCCGTGACTCCTGAAGAGTTTGTCACCTCTGTTAACAAGTACTTTCCACACATTGTTGACACCAAAATACTTTTCAACACTAATTTAATACTACAAGAAAGGATGAAAAGGTCCGGAAAATCACTGGCCTCAGCGTTTTCCTTGTTTTGTCCTCAAATTGCGGCAGGTTCCCAAAGCACTGATCTGGGTTCACCTTGTCATATCAAAGTGGACGTTGAAGTTGATGATTCAAGGTCATCCAGCTGGAACCCTGGAGTCAAGCATGAAGCAGGATATGACGCTTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGAGTTGATTTTAAACTCCATGAATCTTCACAACAATTAGCCCTCAATGAGAAACTACAGAAGTATGTTAACCATTTGTATCTTAGTTGGCTGCATGGGGACATTATTGATCTCAGCACTGGTGTCAAAGTTGCAGATTCTTCGCCGAGCCAGAGTCTCAAGAGGCGGTACCCAAAAATTGTGTTTGAAAACATTGCCATTGTTTGGGGATTTCCTTCCACTCTGAAGGCAAGCGAAGTAAGAGAATGTATATCCGAAGTTTTTGGTTCAACTTCTGTAGTTTCGGTCTACCACTTGGACATGACTGCAGTGTTCGTCCAGTTTAGCAAGACTGAACTAGTTTCCGACTTTCTTTTACTGAAGGACACCTTAGAGAGAAGTGATGGTCCAATCGCGGTTTTGCATCCGCTGGCAAAACTTTTGCAAGGTGGGAATACTTGTGCTGCCAATTACGATACTTATAAAGAAATATGTAGTTCACCCTTGTCGGAAAGTCTTTTTGCTGATCAGGCAAAGGCATTTGGTATAAAGTGGAAGACCAAATTGGTGCAATACGATGTAGCATCGGGGGGCGAAGAACACGAAAATCCCAGTGTACAAGGTGATTTAAATACAGCTGTGAGGTATGCATAA 2055 0.4302 MKTQKLPTLALSRALSRALSSSTTSAASESGPAFPVKTVTTANFEATLSELRHHVRASDFVAIDLEMTGVTSTPWRESFAFDRSDVRYLKVRDSAQKFAVVQFGVCPFRWDPSNRSFIAYPHNFYIFPRQEHAGLGPSFEFLCQTTSIDFLAKYQFDFNACIHEGISYLSREQEKEAMASLNSTYASEWSDVYKLKNSRDIPLVSMADILFTERMKNRFSKWRDGLLQEKYQENQTQGISEDSKQQLQVFFFKMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVCVNSEDSDIQQIVVYTDSKDELNLLLKEVKEENCRAAEMKIQAAVGFRHVIDLLSAEQKLIVGHNCFLDISHVYSKFIGPLPVTPEEFVTSVNKYFPHIVDTKILFNTNLILQERMKRSGKSLASAFSLFCPQIAAGSQSTDLGSPCHIKVDVEVDDSRSSSWNPGVKHEAGYDAFMTGCIFAQLCSDLGVDFKLHESSQQLALNEKLQKYVNHLYLSWLHGDIIDLSTGVKVADSSPSQSLKRRYPKIVFENIAIVWGFPSTLKASEVRECISEVFGSTSVVSVYHLDMTAVFVQFSKTELVSDFLLLKDTLERSDGPIAVLHPLAKLLQGGNTCAANYDTYKEICSSPLSESLFADQAKAFGIKWKTKLVQYDVASGGEEHENPSVQGDLNTAVRYA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0783 684 Gene3D - 38 214 IPR036397 GO:0003676
Lal3g0783 684 Gene3D - 230 515 IPR036397 GO:0003676
Lal3g0783 684 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 35 656 - -
Lal3g0783 684 Coils Coil 307 327 - -
Lal3g0783 684 Pfam CAF1 family ribonuclease 39 467 IPR006941 -
Lal3g0783 684 SUPERFAMILY Ribonuclease H-like 36 478 IPR012337 -
Lal3g0783 684 MobiDBLite consensus disorder prediction 665 684 - -
Lal3g0783 684 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 35 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0783 Lal-Chr3 7064326 7070515 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0783 K01148 - gmx:100784997 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0783 3 7064326 7070515 Lal3g0783 3 7064326 7070515 ECH