Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0782 ATGTCGGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCAGCCTCAGCTGAGGGGTTCACAGTGATTTTTAACAAGGCTAGGGATGAGAAGAAGACAGGTGGCTCTGAGTCACCGGGAAAGGCTGCTGGTGATCCTCATAGCAGACCTGTGGTAGATTCTGGCAAACCGCAGAGTAAAAAATGGTTCTGCTGCATAAACCCTCCTGTGAAATCGTAG 234 0.4872 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPGKAAGDPHSRPVVDSGKPQSKKWFCCINPPVKS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0782 77 PANTHER PROTEIN NOI4 1 71 - -
Lal3g0782 77 MobiDBLite consensus disorder prediction 31 66 - -
Lal3g0782 77 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Lal3g0782 77 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 71 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0782 Lal-Chr3 7039932 7042817 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0782 - - gmx:100305826 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0782 3 7039932 7042817 Lal3g0782 3 7039932 7042817 ECH