Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0779 ATGGGTATTGGTAATCAAGAAGCAATCAAGCAGTTGCAGACCCTGATTGAAAATGTGGATGAGCAACAGAAGAAATCATTCCAGAATCTGCATCAGGGCTATCCAACTGAAACTCTAGCACGGTTTCTTAAAGGAAGGGACTGGAATGTTGCCAAAGCTCATAAAATGTTAATTGATTGTTTGCAATGGAGAGTGGAAAATGAGATTGACAATGTTTTAGCGAAGCCGATCCAAGCAGATTTGTACAGAGCTATCCGAGATTCTCAACTTGTAGGAATGTCTGGATACTCAAAGGAGGGTCTACCTGTCGTTGCTGTTGGTGTTGGGCTTAGCACATTTGACAAAGCATCTCCAACCGCTACAAAGAAGCATGGCCGATACATTGGCACCTGTGTGAAGGTCTTGGATATGACAGGTTTAAAATTATCAGCACTGAGCCAATTGAGGCTTTTGACTTCTATATCTACAATAGATGATTTGAACTACCCAGAAATGACAGACACATACTATATTGTTAATGCGCCATATGTTTTCTCCGCATGCTGGAAGGTTGTAAAACCTCTTTTGCAAGAAAGAACAAGGAAGAAAGTCCAGGTGCTGCAGGGTTGTGGGAAGGAGGAATTACTGAAGATAATGGACTATGCATCCCTCCCACACTTTTGCACAAAAGAAGATTCCAAGTCGTCACGACATCATGCATCATTAAAGACTGAAAATTGTTTCTCCTTCGATCATGTCTTCCATCAACAACTCTATAACTACATCAAGCAACAAGCTATTATTATGGAGACGAGTTTACCGATCATGAGACAAGGGTCCTTCTATGTTCACGTACCAGAGCCTAATCCAGACGATGCTAAAATTGCCAAGACGATAGAAACTGAATTCAACAAAATGGATAATCAGAATGGCTTCTCAAATTCAGTAAATGGTGTTGCAATTAATGGGCATTGA 954 0.4078 MGIGNQEAIKQLQTLIENVDEQQKKSFQNLHQGYPTETLARFLKGRDWNVAKAHKMLIDCLQWRVENEIDNVLAKPIQADLYRAIRDSQLVGMSGYSKEGLPVVAVGVGLSTFDKASPTATKKHGRYIGTCVKVLDMTGLKLSALSQLRLLTSISTIDDLNYPEMTDTYYIVNAPYVFSACWKVVKPLLQERTRKKVQVLQGCGKEELLKIMDYASLPHFCTKEDSKSSRHHASLKTENCFSFDHVFHQQLYNYIKQQAIIMETSLPIMRQGSFYVHVPEPNPDDAKIAKTIETEFNKMDNQNGFSNSVNGVAINGH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0779 317 Coils Coil 5 25 - -
Lal3g0779 317 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Lal3g0779 317 Gene3D - 4 66 - -
Lal3g0779 317 SMART sec14_4 85 226 IPR001251 -
Lal3g0779 317 CDD SEC14 82 220 IPR001251 -
Lal3g0779 317 Gene3D - 70 279 IPR036865 -
Lal3g0779 317 PANTHER - 1 316 - -
Lal3g0779 317 Pfam CRAL/TRIO domain 125 220 IPR001251 -
Lal3g0779 317 SUPERFAMILY CRAL/TRIO N-terminal domain 8 75 IPR036273 -
Lal3g0779 317 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Lal3g0779 317 PANTHER OS09G0258000 PROTEIN 1 316 - -
Lal3g0779 317 SUPERFAMILY CRAL/TRIO domain 80 220 IPR036865 -
Lal3g0779 317 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 119 229 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0779 Lal-Chr3 7009317 7013950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0779 1 310 Acyl Lipid Metabolism Gene Families AT5G47730 59.819 7.43e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0779 - - gmx:100817955 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0779 3 7009317 7013950 Lal3g0779 3 7009317 7013950 ECH