Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0587 ATGAAGAACAACGGTAGCAGCAGTAACACCACCATAGACGAAAGCGTCGTTGACGATTACGGAATGCGTCGAAGCTCTTGCGGCTATTGTAAATCCCCTAATCGCACAAGCATCTCTCACGGCTTGTGGGCACGTAGTCTTACAGTGAGTGATTACCAAGCTCTTCTAGATCGGGGCTGGAGAAGATCTGGATGCTTCCTTTATAAACCATTGATGGAAAGGACGTGCTGCCCTTCTTATACTATTCGCTTGAAAGCAAGTGAGTTTGTTGCTTCAAAGGAGCAACTTCGCGTATCTAGACGATTGCAAAGGTTTTTAGATGGAACCTTGGATAATAAAGAAGTTAATGTTTTGGAGGACCCAAATTCTTCAAAGAAAGCAGAAAGCCTTGTTCATCATAAGTTGTCAAACCTCACGTCAGAAGAGTTCCTATCTGCTAGCAGCGAAGAGCAGAATGAGGTTGAAAAATCTCTGCACGATTTATCGGATAAAATAGATAAGGTTGCAAACATGTTCACTGAGAAGGGCGACTTTCCCTCTGGTATTCAGTTACCAAAAGCTTCGGTCAGAAAGGTTACACAGGCCAAAAAAAAGTTACTAGGCAATAGATCAGAAGATCTCTTATATAGTAGCAATATAGCCTTCCAAATTGCAGCCTCTATAAAACGAGCACAATCAGGAAACAAGGATGGTAGTAAGTCCAAACCATCAAGAGATTGTGAAACAGAGAATGGATCATCTCCTAAACATATTGCAGAAAAGCTGGCATCGTTGTTAGATCAAATAGTGAAAAATTGTGGCCTGTCTATCAGAGCCTGCAATGGACATATCAATTTTTATTCTTCTAGTAAGCAAGTTTCCCCGAGTGCAAGTGCTCAAAATGTTATACAACCTAAAATATCTGGAATGAAAGATGGTGTTGGAGGAAAACGTTTGATTAGTCCTCAACATTGTCAGGTAAAAAGACGAGAGCTTGAGATTCGTTTGAGCAGATCCAGTTTTGATCCAGAAGAATTTGCTTTGTTTAGACGATATCAGCTCAAAGTACATAATGATAAGCTAGATCGTGTTACAGAGGACTCATATCGCAGGTTTCTGGTTGATACTCCATTATTACATGTTTCTCCTACCGGTGACAGTACAGTTCCTCCTTGCGGTTTTGGCTCCTTCCATCAACAATATTTAATAGATGGCCAGTTAGTGGCAGTTGGTGTTGTAGACATCCTTCCCAATTGTATGTCAAGTAAATATTTGTTCTGGGATCCAGACTTTGCTTTTCTATCACTAGGCAAGTACTCTGCACTTCAAGAAATAGATTGGGTGAAAGAAAACCAGGCTTATTGTCCTACTCTTCAGTACTATTATCTTGGCTATTACATTCACTCTTGCAACAAGATGAGATATAAAGCTGCATATCGCCCATCAGAGCTTTTATGTCCTCTTCGATATCAGTGGGTTCCATTTGACATTGCAAGGCCTCTGCTTGACACAAAGCCTTATGTTATCTTATCTGATTATTCCATTTTACAAAATGTCGAGTCATCCCTGCCTCAAATTACTGATGATGTAATGGAAGGCCAGCTTGATGACATTGGTCAAGAAGATGCAAATGATTATCCAATGGATGAAGATGAAGATGAAGAAAGGGTTGAATCGGAAAGTTCTGATGATTACACAGGCCTAGAAACTACTTCAGATGGTGAACCAGAAAATGGTGATATCAGCAAAATTTTGCTAGGATTGGAAGGAAATTTGAGATACAAGAATCTGCAAAATGCCATTGATCCTGAGCAGAGGAATTACTTGGAAACCCAGTTGCAGAAATACATGAGGGTTGTGGGTCCTGAATTAGCTGAGCGAATGGTTTACTCTCTTCAATAA 1881 0.403 MKNNGSSSNTTIDESVVDDYGMRRSSCGYCKSPNRTSISHGLWARSLTVSDYQALLDRGWRRSGCFLYKPLMERTCCPSYTIRLKASEFVASKEQLRVSRRLQRFLDGTLDNKEVNVLEDPNSSKKAESLVHHKLSNLTSEEFLSASSEEQNEVEKSLHDLSDKIDKVANMFTEKGDFPSGIQLPKASVRKVTQAKKKLLGNRSEDLLYSSNIAFQIAASIKRAQSGNKDGSKSKPSRDCETENGSSPKHIAEKLASLLDQIVKNCGLSIRACNGHINFYSSSKQVSPSASAQNVIQPKISGMKDGVGGKRLISPQHCQVKRRELEIRLSRSSFDPEEFALFRRYQLKVHNDKLDRVTEDSYRRFLVDTPLLHVSPTGDSTVPPCGFGSFHQQYLIDGQLVAVGVVDILPNCMSSKYLFWDPDFAFLSLGKYSALQEIDWVKENQAYCPTLQYYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWVPFDIARPLLDTKPYVILSDYSILQNVESSLPQITDDVMEGQLDDIGQEDANDYPMDEDEDEERVESESSDDYTGLETTSDGEPENGDISKILLGLEGNLRYKNLQNAIDPEQRNYLETQLQKYMRVVGPELAERMVYSLQ 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0587 626 MobiDBLite consensus disorder prediction 224 247 - -
Lal3g0587 626 Pfam Arginine-tRNA-protein transferase, C terminus 337 479 IPR007472 GO:0004057|GO:0016598
Lal3g0587 626 PANTHER ARGINYL-TRNA--PROTEIN TRANSFERASE 2 5 626 - -
Lal3g0587 626 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 323 492 IPR016181 -
Lal3g0587 626 MobiDBLite consensus disorder prediction 532 553 - -
Lal3g0587 626 PIRSF ATE1_euk 4 626 IPR017137 GO:0004057|GO:0016598
Lal3g0587 626 MobiDBLite consensus disorder prediction 532 574 - -
Lal3g0587 626 MobiDBLite consensus disorder prediction 228 247 - -
Lal3g0587 626 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 5 626 IPR030700 -
Lal3g0587 626 Pfam Arginine-tRNA-protein transferase, N terminus 25 95 IPR007471 GO:0004057|GO:0016598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0587 Lal-Chr3 4449893 4458938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0587 K00685 - gmx:100780234 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0587 3 4449893 4458938 Lal5g1127 5 14016720 14022950 LSH