Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0567 ATGGAGAAACAGAGAGGTAAAGGTCACAGATTGTTGCTGATGCCATCACCCTTACAAGGCCACATAACACCTTTACTTCAACTTGCACAAATCCTCTTCTCTAATGGTTTCTCAATCACTATCATCCACACTTTCTTCAATTCTCCCAACTCTTCCACATACCCTCACTTCTCTTTCCACCCCATCAATGATTTCTTATCTGATGCAGAAGCCTCTACCTCAGATCCCATACACCTCACTGATCTCATCAATACCAGATGCAAACAACCTTTGCAGGAATCTTTGTCTACGTTGTTATCTCATAATCATGATGATGATGAGGATTCTATTGCTTGTTTCATTTCTGATGCTGCTCTTCATTTTACTCAAGATGTTTGTGATGGTTTCAACCTTCCCAGACTTGTTCTAAGAACTGGTGGGGCCTCGTCGTTTGTTGTTTTCGCTTCATTTCCGTTGTTGAGACAAAAAGGTTACCTACCTGTTCAAGAATCTCGATTGGAAGAGCCAGTGGTTGAGCTTCCACCACTCAAAGTGAAAGACCTTCCTAAGATGGAGTCGCGCGATCCTGAGGCATTTTATAAACTAGTTTGTCGATTTGTTGATGAATGCAAGGCCTCTTCAGGAGTAATTTGGAACTCCTTTGAAGAATTGGAATCATCCGCACTTGCAAAGCTTCGTGAAGTACTTTCCATACCAATATACCCTATAGGCCCTTTTCACAAACACTTCCCAGCAGGGTCAACTTCTTCTAGTTTATTGACCCCAGACAAAAGCTGCATCTCTTGGCTAGATAGACAAGATCATCATAGTGTTGTTTATGTAAGTTTTGGGAGTATGGCAGCAATAAGTGAGGCTGAGTTCTTGGAGATAGCTTGGGGGTTAGCCAACAGCAATCAACCATTCTTGTGGGTCATTCGACCCGGGTTGGTTCGCGGCTCAGAATGGCTTGAATCATTGCCATGTGGGTTCCTGGAGAATCTGGAAGGACGAGGTTGCATTGTCAAATGGGCTCCTCAAGAACAAGTGCTTAGCCATTCTGCCCTCGGAGCTTTTTGGACTCATAATGGTTGGAACTCAACTTTGGAGAGCATATGCGAAGGGGTTCCTATGATATGTAGTCCATGTTTTGCAGACCAAAAGGTAAATGCCAAATATGTAAGTGATGTTTGGAGGGTTGGAGTTCAGTTACAGAATAAGCTGGAGAGAGGGGAGATAGAGAGGACCATTAGAAAACTAATGGTTGGGAATAAAGGGGATGAAATTAGACACAATACCTTACATCTCAAGGAAAAGGCAAATCTCTGCTTGAAAAATGGTGGTTCCTCTTATCGCTTCCTTGATAGCTTGGTTAGTGACATATTATCGTTGGAATCATCAACATCCAGAACTCATTGA 1395 0.4272 MEKQRGKGHRLLLMPSPLQGHITPLLQLAQILFSNGFSITIIHTFFNSPNSSTYPHFSFHPINDFLSDAEASTSDPIHLTDLINTRCKQPLQESLSTLLSHNHDDDEDSIACFISDAALHFTQDVCDGFNLPRLVLRTGGASSFVVFASFPLLRQKGYLPVQESRLEEPVVELPPLKVKDLPKMESRDPEAFYKLVCRFVDECKASSGVIWNSFEELESSALAKLREVLSIPIYPIGPFHKHFPAGSTSSSLLTPDKSCISWLDRQDHHSVVYVSFGSMAAISEAEFLEIAWGLANSNQPFLWVIRPGLVRGSEWLESLPCGFLENLEGRGCIVKWAPQEQVLSHSALGAFWTHNGWNSTLESICEGVPMICSPCFADQKVNAKYVSDVWRVGVQLQNKLERGEIERTIRKLMVGNKGDEIRHNTLHLKEKANLCLKNGGSSYRFLDSLVSDILSLESSTSRTH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0567 464 Gene3D Glycogen Phosphorylase B; 11 440 - -
Lal3g0567 464 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 457 - -
Lal3g0567 464 CDD GT1_Gtf-like 10 422 IPR002213 GO:0008194
Lal3g0567 464 PANTHER CYTOKININ 7-BETA-GLUCOSYLTRANSFERASE-RELATED 5 457 - -
Lal3g0567 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 454 - -
Lal3g0567 464 Gene3D Glycogen Phosphorylase B; 254 434 - -
Lal3g0567 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 416 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0567 Lal-Chr3 4289233 4291862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0567 7 458 Glycosyltransferase AT3G55700 52.928 6.30e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0567 - - gmx:100783133 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0567 3 4289233 4291862 Lal3g0567 3 4289233 4291862 ECH