Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0550 ATGGAGAACAAGATGAATAAACCTTGTACTGACCAACTTAAAGTATCAAAATTCTTTGTTGTCCCAGAAAAACTAGGCGATATTGTTAAAATCTTGATAAAGATAGGCATAGTTATATGCCTTATTGCATTCCTTTCACTTGCATTCCACACAGCATTCTTTAAACCATCGTGGCGGCTATTCGGATTACCGGAGCATTTACGTGTGCAGAATGATTCACTGATTGACAATGGACCAACAAACATCTCACATATTCTATTTGGCCTAGGTGGTTCAGCCCAGACATGGCATGACCGTAGTAATTATAGTAAGATCTGGTGGGAACCAAATACCACTAGAGGCTTTGTTTGGCTTGACAAGAAACCTAAGATTTCAGACACTGACTTGTTAGTACCATATAAAATCTCACATGGTTGGAGACAGTTCAAGTACTTGCACTCAGCATCTGCAGTTCGGATAGCTCGAATAGTTTACGAGAGCTTTAAACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACAGTGTTTTTTACCAAGAACTTAGTTACTGTGTTTAGAAAATATGATCACAATCAAATGTACTATATTGGTGGAAATTCTGAGAGTGTGGAGCAAGATATGATGCATTCTTATGACATGGCTTTTGGTGGGGGTGGAATTGCAGTCAGTTATGCATTAGCAGCTCAACTAGCCAGAACTATGGATGGTTGTCTCCACAGATACTTCTATTTTTATGGTTCTGATCAACGAATCTGGGCATGCGTGAACGAAATCGGCGTGCCTCTTACCCATGAAAAAGGATTCCACCAGCTTGATATAAAAGGTGATCCATATGGTCTTTTAGCAGCTCATCCTATGGCACCACTAGTATCACTCCATCACATTGATCAATTGAGCTCAGTGTTTCCTAACCAGACCCAAACACATTCCTTGACAAAGCTCATCAGTGCATATAACATCGACCCTGCCCGGATAGTGCAGCAAAGTATATGCTATGATCATAAGCGTAGATGGTCGATATCTATTTCATGGGGTTACACAGTACAAATATATACAACAATGTTGTCAGCTTCAGACTTGCAGATGCCATTGCAGACATTCTTTACATGGCGAACTTTCAGCGATGGTCCATTTACGTTTAATACTCGATGGATGAACCCGGATCCATGCCAGCAGCCAGCTATGTTTTTCCTAGACAAGCTTCAAATGGTTGGCTCAAAGGGAAGTATCACCAGCTACAACAGATATTTTGCCAAAGGAGCAGAGAAGTGCAACAAATCACATTTTAATGTGGAAGTGCAGACAATTAGTGTTTCTGCCTTGATTCTGGATCCAGAATATTGGAAAAATGTACCACGTAGACAGTGCTGCCAAATTATGCATGGTGGAAGTATAAAGGGTGGGAATATGCATCTCAGGGTTAAGAAGTGCAGACCAACAGAAACAACTGCTATATAA 1470 0.4054 MENKMNKPCTDQLKVSKFFVVPEKLGDIVKILIKIGIVICLIAFLSLAFHTAFFKPSWRLFGLPEHLRVQNDSLIDNGPTNISHILFGLGGSAQTWHDRSNYSKIWWEPNTTRGFVWLDKKPKISDTDLLVPYKISHGWRQFKYLHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTKNLVTVFRKYDHNQMYYIGGNSESVEQDMMHSYDMAFGGGGIAVSYALAAQLARTMDGCLHRYFYFYGSDQRIWACVNEIGVPLTHEKGFHQLDIKGDPYGLLAAHPMAPLVSLHHIDQLSSVFPNQTQTHSLTKLISAYNIDPARIVQQSICYDHKRRWSISISWGYTVQIYTTMLSASDLQMPLQTFFTWRTFSDGPFTFNTRWMNPDPCQQPAMFFLDKLQMVGSKGSITSYNRYFAKGAEKCNKSHFNVEVQTISVSALILDPEYWKNVPRRQCCQIMHGGSIKGGNMHLRVKKCRPTETTAI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0550 489 PANTHER FRINGE-RELATED 10 487 - -
Lal3g0550 489 PANTHER BNAA05G27650D PROTEIN 10 487 - -
Lal3g0550 489 Gene3D - 75 341 - -
Lal3g0550 489 Pfam Protein of unknown function, DUF604 209 461 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0550 Lal-Chr3 4130029 4133485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0550 11 485 Glycosyltransferase AT3G11420 54.158 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0550 - - gmx:100802549 731.48