Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0546 TGTATAGCAACGAAAAAGCACTGCGCAGAATCAACAATGGCGAATCCAGAGAGCAGCACCAGAAGCTCAAGATGGTCCCTTAGGGGAACCACCGCTCTTGTTACTGGCGGAACTCGCGGGATCGGGCACGCTGTGGTGGAGGAACTGGCGGAGTTTGGTGCCACCGTGTACACTTGTTCTAGGAATGAAGAGGAACTTAATTCACGTTTAAAGGAGTGGAAAGATAAGGGATTTTCAGTTATAGGGTCAGTTTGTGATGCTTCTTCTCCGACCCAAAGAGAGAAGCTTATTCAACAAGTGGCTTCTGCCTTCGACGGCAAGCTCAACATACTTGTGAACAATGTTGGAACGAATACTAGGAAGCCAACAATTGAGTATACTGCTGAAGAATATTCGAAAGTGATGACTACTAACCTGGACTCTACTTACCATCTCTGCCAACTTGCATATTCTCTTCTTAAAGCATCCGGAAATGGAAGCATTGTGTTCATTTCCTCTGTTGCAGCTGCCATCAATCAGCTTACAAAAAACCTTGCTTGTGAATGGGCAAAAGACAATATAAGAAGCAACGCAGTTGCACCCTGGTACACAAAAACGCCACTTGTGGAAACGTTGCTTGCAAAAAAAGATTTTGTCGACGAAGTCATATCTCGAACGCCGATAAAGCGGATAGCAGAAGCACATGAAGTCTCATCCTTGGTAGCATTCCTTTGCCTGCCAGTTGCTTCCTATATCACTGGCCAGATTATTTCTGTTGATGGAGGATTTACTGTGAATGGATTTCAACCCACCATGAATTTAACTTAA 807 0.4449 CIATKKHCAESTMANPESSTRSSRWSLRGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEEELNSRLKEWKDKGFSVIGSVCDASSPTQREKLIQQVASAFDGKLNILVNNVGTNTRKPTIEYTAEEYSKVMTTNLDSTYHLCQLAYSLLKASGNGSIVFISSVAAAINQLTKNLACEWAKDNIRSNAVAPWYTKTPLVETLLAKKDFVDEVISRTPIKRIAEAHEVSSLVAFLCLPVASYITGQIISVDGGFTVNGFQPTMNLT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0546 268 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Lal3g0546 268 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Lal3g0546 268 PRINTS Glucose/ribitol dehydrogenase family signature 164 183 IPR002347 -
Lal3g0546 268 PRINTS Glucose/ribitol dehydrogenase family signature 185 202 IPR002347 -
Lal3g0546 268 PRINTS Glucose/ribitol dehydrogenase family signature 220 240 IPR002347 -
Lal3g0546 268 Gene3D - 11 261 - -
Lal3g0546 268 Pfam Enoyl-(Acyl carrier protein) reductase 38 257 - -
Lal3g0546 268 PANTHER TROPINONE REDUCTASE 16 264 IPR045000 GO:0016491
Lal3g0546 268 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 16 264 - -
Lal3g0546 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 259 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0546 Lal-Chr3 4069276 4072852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0546 24 263 Miscellaneous Gene Families AT2G29290 60.311 6.96e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0546 K08081 - gmx:100819646 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0546 3 4069276 4072852 Lal3g0546 3 4069276 4072852 ECH