Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0537 ATGACGTTTTGGACTCTTTACAAATATAACTCACTCTCTTCACCTCATCACTCTCTCTTTTCAATTTCATTCCAAAACCCTAACCACACTATAACTCAAACTCAAGAACAAGAACAAGAACAAGAAGACAAAGAAGAAGAAAGAGGAGTAGTTGTAATGGGAGATCCAGTTGAGAGGTTTGGATCGGAGGTTTTGGATTCCACAACCGTTATCAAGGACGCTTCCGCTGATGATCTCTGCATGGAAATCGATCCGCCGTTAAGAGAAAACGTTGCCACCGCTGAGGACTGGCGGAAAGCTTTGAACAAAGTCGTACCTGCCGTCGTCGTCCTCCGCATCACTGGTTGCCGTGCTTTTGATACTGAGTCTGCTGGTGCTAGCTCCGCCACCGGCTTCATTGTTGACAAACGCCGCGGTATTATTCTCACCAATCGCCACGTTGTCAAGCCCGGACCTGTAGTTGCAGAAGCCATGTTTTTGAACCGTGAAGAGGTTCCAGTGCATCCTATATACAGAGATCCAGTCCATGATTTTGGGTTCTTTCGTTATGACCCTGGTGCTATCCAATTTTTAAACTATGAGGAGATTCCTCTTGCTCCCGATGCTGCTTCTGTTGGACTAGAAATCAGGGTTGTCGGTAATGATAGTGGTGAGAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGTTTGGACAGGGATGCTCCTCACTATAAGAAGGATTCTTACAACGACTTCAACACATTCTATATGCAAGCAGCCTCTGGGACCAAAGGAGGATCAAGTGGTTCCCCAGTTATAGATTGGCTAGGCAGAGCAGTGGCCTTGAATGCTGGGAGTAAGACATCAAGTGCATCAGCATTCTTTTTACCTCTAGAACGGGTTGTAAGGGCATTAAAGTTTCTTCAAGAGGGCAGTGAAACCTATGTTGAGAAATGGAAGGCAGTTTCTATACCTCGTGGTACACTTCAGGTGACATTTCTCCATAAAGGGTTTGATGAGACTCGCCGACTTGGCCTTGGAAGTGAGACAGAGCAGATAGTACGCCATGCTTCTCCAGATGGTGAAACTGGAATGCTTGTTGTGGACTCTGTGGTGCCAGGAGGTCCTGGACATAAGCATTTGGAACCGGGTGACATACTTGTTCGTGTCAATGGAGATGTCATCACACAATTCCTGAAACTGGAGACTATACTTGATGACAGTGTAAACAAGAATATTGAATTACAAGTTGAAAGGGGTGGCACAACAAAGACACTATTGTTGTTGGTTCAAGACTTGCACTCAATAACTCCTGATTATTTCTTAGAAGTTAGTGGGGCAGTAATACATCCTCTTTCTTATCAGCAGGCTAGAAACTTCCGTTTCAATTGTGGTCTTGTTTATGTGACTGAACCAGGATATATGCTCTTTAGAGCAGGAGTTCCTCGACATGCAATAATTAAGAAGTTTGCTGGTCAAGAAATATCTTGTCTTGAGGAACTTATATCAGTTCTCTCTAAGCTATCTAGGGGTGTTCGAGTACCATTAGAGTATATAAGCTACATGGATCGTCATCGAAGGAAGTCTGTGTTGGTGACAGTTGATCGCCATGAATGGTATGCACCTCCTCAGATATACGCTCGTGATGACAGTACTGGCCTCTGGATTGCTAAGCCTGCTTTTCAGTCCAATTCCCTTTTTCTATCATCTGGTGTTAAAGATGTTGGAAATCTTGCCAGACAGCCAGTTTCACTAACTGAAGAGCATGCTTTTGGGGGAAATGTTTCTGAAGATAACAATCAGGAGTTGGTTGATGGTGTCACTAGCTTGGAAACCAATCATGAAGATCCTTCTGCGTATGCATCTCATCATATTGTGTCTGATGGTGTGGCCAAAAAACGAAGAGTAGAGGACTGTTTATCCGCTGATGGAAGTGTTCTTACTGATCTATCCTTAAATGGAACTGGGGAAGCTAAGCTAGAAAAATCAAGTGCCATTCAGGATGATGTGTTAATGGACTATCAAGGTGCAACTGCCGCAGCAGCAAATGCATCATTTTCTGAACGTGTCATTGAGCCTACTCTTGTAATGCTTGAGGTTCATGTTCCTCCATCTTGTATGCTTGATGGTGTTCATTCACAGCACTTTTTCGGAACTGGTGTCATAATATATCACTCTCAAGATATGGGATTAGTTGCAGTTGACAAGAACACAGTTGCAATATCTGCCTCTGATGTGATGCTATCCTTTGCTGCTTTCCCAGTTGAAATTCCAGGAGAGGTGGTATTTCTCCATCCTGTTCATAATTATGCTCTTATATCATATGATCCTTCTGCTTTGGGACCTGTTGGTGCTTCAGTGATTCGTGCTGCAGAGTTACTCCCAGAGCCAGCATTATGTCGAGGGGATTCTGTCTACCTTGTGGGATTGAGTAGAAGCCTTCAAGCAACTTCTAGAAAATCTGTTGTTACCAATCCTTGTGCTGCAGTAAATATAGGATCAGCTGATTCACCACGTTACAGAGCAACCAATATGGAAGTAATTGAGCTTGATACTGATTTTGGTAGTACATTTTCGGGTGTGCTAACAGACGAACAAGGCAGGGTGCAAGCTATATGGGGAAGCTTCTCTACTCAGGTGAAATTTGGTTGCAGTACGTCAGAAGATCATCAATTTGTGAGGGGTATACCAATTTATGCAATAAGTCAGGTCCTCGACATGATTGTATCTGGTGAAAATGGGCCACCTCGTCTCATAAATGGTGTCAAAAGGCCTATGCCGCTTTTGAGAATTTTAGAGGTAGAACTTTATCCAACATTGCTTTCAAAGGCTCGGAATTTCGGATTAAGTGATAACTGGATTCAGGCACTAGTTAAGAAAGACCCAATAAGACGTCAGGTTTTACGTGTTAAAGGTTGTTTTGCTGGTTCAAAAGCTGAGAATCTTTTAGAACAAGGAGACATGGTTTTAGCCATCAATAAAGAACCAGTCACATGCTTCCGTGACATTGAAAATGCTTGTCAAGCTTTAGACAAATCTTATGACGGTGACAATGATGGAAAGGTTCATATGACAATTTTCCGGCAGGGGCGAGAGGTTGAGCTTCTTGTGGGAACAGATGTTAGGGATGGAAATGGTACAACTCGTGCAATTAATTGGTGTGGTTGTATTGTTCAAGATTCACATCCAGCAGTACGTGCTCTTGGATTTCTTCCTGAAGAAGGTCACGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCTGTACATAGATATGGTCTATATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAAATTTAGATTCTTTCATTGATGTGACAAAGGAACTTGAGCACGGAGAATTTGTTCGAGTAAAGACGATTCACCTCAATGGGAAGCCACGAGTCATGACATTGAAGCAAGATTTGCACTATTGGCCTACGTGGGAATTGAGATTTGATCCAGACACTGCAATTTGGCATCGTAATATAATCAAGTCATTGAACTCCACCACTACTGCGGTGGTGCACATTTGA 3528 0.4311 MTFWTLYKYNSLSSPHHSLFSISFQNPNHTITQTQEQEQEQEDKEEERGVVVMGDPVERFGSEVLDSTTVIKDASADDLCMEIDPPLRENVATAEDWRKALNKVVPAVVVLRITGCRAFDTESAGASSATGFIVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPGAIQFLNYEEIPLAPDAASVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDSYNDFNTFYMQAASGTKGGSSGSPVIDWLGRAVALNAGSKTSSASAFFLPLERVVRALKFLQEGSETYVEKWKAVSIPRGTLQVTFLHKGFDETRRLGLGSETEQIVRHASPDGETGMLVVDSVVPGGPGHKHLEPGDILVRVNGDVITQFLKLETILDDSVNKNIELQVERGGTTKTLLLLVQDLHSITPDYFLEVSGAVIHPLSYQQARNFRFNCGLVYVTEPGYMLFRAGVPRHAIIKKFAGQEISCLEELISVLSKLSRGVRVPLEYISYMDRHRRKSVLVTVDRHEWYAPPQIYARDDSTGLWIAKPAFQSNSLFLSSGVKDVGNLARQPVSLTEEHAFGGNVSEDNNQELVDGVTSLETNHEDPSAYASHHIVSDGVAKKRRVEDCLSADGSVLTDLSLNGTGEAKLEKSSAIQDDVLMDYQGATAAAANASFSERVIEPTLVMLEVHVPPSCMLDGVHSQHFFGTGVIIYHSQDMGLVAVDKNTVAISASDVMLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGASVIRAAELLPEPALCRGDSVYLVGLSRSLQATSRKSVVTNPCAAVNIGSADSPRYRATNMEVIELDTDFGSTFSGVLTDEQGRVQAIWGSFSTQVKFGCSTSEDHQFVRGIPIYAISQVLDMIVSGENGPPRLINGVKRPMPLLRILEVELYPTLLSKARNFGLSDNWIQALVKKDPIRRQVLRVKGCFAGSKAENLLEQGDMVLAINKEPVTCFRDIENACQALDKSYDGDNDGKVHMTIFRQGREVELLVGTDVRDGNGTTRAINWCGCIVQDSHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPNLDSFIDVTKELEHGEFVRVKTIHLNGKPRVMTLKQDLHYWPTWELRFDPDTAIWHRNIIKSLNSTTTAVVHI 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0537 1175 ProSiteProfiles PDZ domain profile. 324 385 IPR001478 GO:0005515
Lal3g0537 1175 Gene3D - 199 312 IPR043504 -
Lal3g0537 1175 PANTHER PROTEASE DO-LIKE 7 76 1165 - -
Lal3g0537 1175 SUPERFAMILY Trypsin-like serine proteases 95 299 IPR009003 -
Lal3g0537 1175 SMART pdz_new 945 1023 IPR001478 GO:0005515
Lal3g0537 1175 SMART pdz_new 1059 1128 IPR001478 GO:0005515
Lal3g0537 1175 SMART pdz_new 335 414 IPR001478 GO:0005515
Lal3g0537 1175 SUPERFAMILY PDZ domain-like 962 1066 IPR036034 GO:0005515
Lal3g0537 1175 Pfam Trypsin-like peptidase domain 129 275 - -
Lal3g0537 1175 Gene3D - 84 194 IPR043504 -
Lal3g0537 1175 Gene3D - 960 1036 IPR036034 GO:0005515
Lal3g0537 1175 SUPERFAMILY Trypsin-like serine proteases 686 891 IPR009003 -
Lal3g0537 1175 Pfam PDZ domain 352 419 IPR001478 GO:0005515
Lal3g0537 1175 Gene3D - 1043 1141 IPR036034 GO:0005515
Lal3g0537 1175 PRINTS HtrA/DegQ protease family signature 139 151 IPR001940 GO:0004252|GO:0006508
Lal3g0537 1175 PRINTS HtrA/DegQ protease family signature 205 229 IPR001940 GO:0004252|GO:0006508
Lal3g0537 1175 PRINTS HtrA/DegQ protease family signature 246 263 IPR001940 GO:0004252|GO:0006508
Lal3g0537 1175 PRINTS HtrA/DegQ protease family signature 373 385 IPR001940 GO:0004252|GO:0006508
Lal3g0537 1175 Gene3D - 336 426 IPR036034 GO:0005515
Lal3g0537 1175 SUPERFAMILY PDZ domain-like 1068 1150 IPR036034 GO:0005515
Lal3g0537 1175 Pfam PDZ-like domain 428 501 IPR025926 -
Lal3g0537 1175 Pfam PDZ-like domain 1040 1116 IPR025926 -
Lal3g0537 1175 CDD PDZ_serine_protease 335 419 - -
Lal3g0537 1175 SUPERFAMILY PDZ domain-like 359 457 IPR036034 GO:0005515
Lal3g0537 1175 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 76 1165 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0537 K22686 - gmx:100777219 1989.93