Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0523 ATGGACGATAACAACACTGATCGCTTGATTCAGAAAATAGCTACGATCTTCGACGAGGCTCGAACCTCTTACGCCACTCACAATCGAAAGCTCAAGGAACTTTCCCTTCTCCGATCCAAATTCCTTTCAATTTCCCAATTCTTCTCTGCCTTCTCCCAAACCCTAACTCCTCTCTTCGACTTCCAGCGCCGCATCGCCTCCGCTGACCGTGTTGTATGCTTCGTCTCCGCCTTTGCTGCCGCCCGTGACCCTGCTCACGAATCCGATTCCGATGAGTTCCTTGAGCTTTTCCTCAAGTTCCTGCTTGTTGCTGCTGTGGCTGCTAACAAGACTGCTAGGTTCCGAGCTTGCCAGATCGTCTCTGAGATAATATTGCGGCTTCCAGATGATGCAGAAGTGAGCAATGAGGTATGGGATGAGGTGATAGAATGCATGAAGTTGAGGGTAGGGGACAAGATCCCTTTGGTGCGTACATTGGCAGTTAGGGCGCTTTCTCGCTTTGTGAATGACACTGTGAATAGTGACATACTTGCTTTGTACCTTGAGCTGCTCCCTTTGGAGCAAAATGCGGATGTTCGTAAGATGATTGTGTTGTCTTTGCCTCCATCTACTGCAACTTCTCAAGTTATCATTGACTGCACTTTGGATGTGAGTGAATCTGTACGCAAAGCAGCATACCGTGTTCTAGCTAACAAATTCCCTCTTCATAGCTTAAGTATTAAGCTCAGGACACTGATTCTTCGGAGAGGACTTGCCGACCGATCTGTTGCTGTCTCAAAGGAATGTTTCAAACTTTTGAAAGATGAATGGCTTGTAAAGTGCTCTAATGGTAATCCTTTAGAGCTTCTCAAGTATCTTGATGTTGAAACCTATGAATCTGTGGGTGAGTCTGTCATGGAAGCGCTTCTAGAAGCTGGTTTGGTAAATCTACAGAGTGGTGAAAGTATCCAGCAGTATATATCAACAAATGGTGACACAATAGAAGGGGACTCATTGCATTGCCAACCGATCATTCAGCTAATGGAAGCAGAGGCTGCCATATATTGGAGAACTGTATGCAAGCATTTGCAGTCAGAAGCACATGCCAAAGGCTCTGATGCTGCAGCTACAATGGGAACTGAAGCAGAAGTCTACGCATCAGAAGCATCAGATAAAAATGATCTTCTAGGAAAAATTCTTCCAGTAACAGTTAGTGATTACATAGAGTTGGTCAGAGCTCATATCAATGCTGGATCTAATCATCGCTTTGCATGCCGCCAGCTGCTATTGCTTGGTGTCATGTTCGATTTTTCTGATGCCACAAATAGAAAGGCTGCTAGTGCATTTCTGCATGAGCTGATGTGCACACCTCCTGAGCATGAGGTTGATAATGAAGGCAATGTGGTTATCATTGGAGATGGGTTAAGTTTTGGTTGTGACAATGATTGGGCTGAAGCAGTAGCCAGGTTGGCAAGGAAAGTCCATGCTACTCCTGGTGGATTTGAAGAAATTATTCTTGCAATAATAGAAGAGCTAGCTCAACCTTGCAGGGAGAGAACAGCTGATTTTGTGCAGTGGATACACACCCTTTCCCTTACTGGCCTTTTGTTGAAAAATGCTAAGTCATTGCGACTTCTTCAGGGCAAGGCTATTGAACCAGATGAACTTCTCCAATCTTTACTACTTCCTGGGGCCAAACATGCTCACTTGAGTGTGCAAAGGATTGCTGTTAGATGTCTTGGTCTTTTTGGCCTTTTGGAGAGGAAACCGAGTGTGGAACTTTTGAAGCAACTGAGAATTTCGTATATGAAAGGGCCACATCCAATTAGTATAGAGGCCTGTAAAGCATTAATGGATCTTGGGATGTGGCATGATCCTCAAGAAGTTGACAGGGTGTTAAAGCCAGATAATTCATCCCAAATCAACTGTGACAAAAAGACTTTTAGTCCTGTGAACTTTTCTGAATCAGAAGGGGATTTAGATGTTGGGCTGCTTGATCTCTTATATGGTGGCTTTGAAAAAGATGATTGGGCTAGTCCCTTAACTAGCAATGAGGATGAGTGTGTTTATGCTGTTCTTGGAGAGGGGTTTGCAAAAATTCTTCTCCTAAGTGAAAAGTATCCAAGCATACCGGATTCATTACACCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGTGACGTGTCCGAACATCTGCAGAGGTGGTTGAAGCAATGTTTGTCTGTCTTTTTTGAGCACTACTCATTGCAGAGGTGCATAACCAAGACTTTCGTTCCAGTTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATCCTGGAGGTTCTCCTTTTATGGTGTCCCAGATGCGTAAACGAGCTGTTCAAGCTTCACGTTTTATGCTGCAGATGATGCAGGTTCCTTTATATGTTAAAGAGACTCAACCAGAGAGTGAAAGTTCTAGTATGGAACATCCACAAGTCATAGATAGTAGTGGTGAAGTTGCATTTGAGTGTGGTGAAGAGGGGCTTGCACTAAGCTTAGCCATTGAGGTGGTAAGCTTTCATTCGAAGAAGACAGCTGCAGAGAAGGCATATGTGTCAGCATTATGTAAAACACTTGTGTTGCTTCATTTTCGCTTATCAGAACAACAGGCAATAAAATTGATGAGGAGGCTTTTGATACTCATGCTTGAACGTGTCTCTTCAGAGAAGGATCTTGTCAAAGAATTGAAGCACATGGCTGAACATCTCATGACAGTAGATATGCAACCAGATCAGGAATTGCTACAAGATGATGTTAATCTCATTTTAGGGAAGTTGGAACTTGACTTAAACCTGGATTTGGATAGTTCTGTTACAATGCTGCCACAGACACCAGCTGCACCCCCAACCAGGTCTACACGTAGGAGAAGGGTTAGGATTGAGGAGGAAGATAGTTCCGATGAAGCTTCACCAGCTTCTGAAGTTCCTACCACCCATAATACCGTAAGATGTCGGTCAGAAAGAGCAAGCAAAACTGCAGCATTGAACAAGATGTCTGCTCGTAGATCACTAAAAACTGATGAAATTGATGAAACTGAAGAGCAAGAGGAAGTAGACTCTGATGTAACTTCTGAAGATTATGATGAATATGATCAGTAG 3105 0.4354 MDDNNTDRLIQKIATIFDEARTSYATHNRKLKELSLLRSKFLSISQFFSAFSQTLTPLFDFQRRIASADRVVCFVSAFAAARDPAHESDSDEFLELFLKFLLVAAVAANKTARFRACQIVSEIILRLPDDAEVSNEVWDEVIECMKLRVGDKIPLVRTLAVRALSRFVNDTVNSDILALYLELLPLEQNADVRKMIVLSLPPSTATSQVIIDCTLDVSESVRKAAYRVLANKFPLHSLSIKLRTLILRRGLADRSVAVSKECFKLLKDEWLVKCSNGNPLELLKYLDVETYESVGESVMEALLEAGLVNLQSGESIQQYISTNGDTIEGDSLHCQPIIQLMEAEAAIYWRTVCKHLQSEAHAKGSDAAATMGTEAEVYASEASDKNDLLGKILPVTVSDYIELVRAHINAGSNHRFACRQLLLLGVMFDFSDATNRKAASAFLHELMCTPPEHEVDNEGNVVIIGDGLSFGCDNDWAEAVARLARKVHATPGGFEEIILAIIEELAQPCRERTADFVQWIHTLSLTGLLLKNAKSLRLLQGKAIEPDELLQSLLLPGAKHAHLSVQRIAVRCLGLFGLLERKPSVELLKQLRISYMKGPHPISIEACKALMDLGMWHDPQEVDRVLKPDNSSQINCDKKTFSPVNFSESEGDLDVGLLDLLYGGFEKDDWASPLTSNEDECVYAVLGEGFAKILLLSEKYPSIPDSLHPVLLSKLIYLYFSDVSEHLQRWLKQCLSVFFEHYSLQRCITKTFVPVMRSMWPGIFGNPGGSPFMVSQMRKRAVQASRFMLQMMQVPLYVKETQPESESSSMEHPQVIDSSGEVAFECGEEGLALSLAIEVVSFHSKKTAAEKAYVSALCKTLVLLHFRLSEQQAIKLMRRLLILMLERVSSEKDLVKELKHMAEHLMTVDMQPDQELLQDDVNLILGKLELDLNLDLDSSVTMLPQTPAAPPTRSTRRRRVRIEEEDSSDEASPASEVPTTHNTVRCRSERASKTAALNKMSARRSLKTDEIDETEEQEEVDSDVTSEDYDEYDQ 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0523 1034 Coils Coil 997 1017 - -
Lal3g0523 1034 MobiDBLite consensus disorder prediction 1012 1034 - -
Lal3g0523 1034 Gene3D - 53 238 IPR011989 -
Lal3g0523 1034 SUPERFAMILY ARM repeat 83 756 IPR016024 -
Lal3g0523 1034 MobiDBLite consensus disorder prediction 941 1034 - -
Lal3g0523 1034 Pfam Nuclear condensing complex subunits, C-term domain 522 866 IPR025977 -
Lal3g0523 1034 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 5 1018 IPR027165 GO:0000796|GO:0007076
Lal3g0523 1034 PANTHER CONDENSIN COMPLEX SUBUNIT 3 5 1018 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0523 K06678 - gmx:100817677 1460.66