Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0521 ATGTTTCTGCGTGTGACAGCATCTAATTTACTCAGAAAACTTCGTTTTCCTTCTTCCCACTCCTTCTCTTTTTCTGAAAAATTCAAACTTTTCAGTGGCTATCAAACTCAGACTAGTGGTTGGAGGGTATTAAATCAAAGGGATCCTTTTCTATGGATTCTAATATCTGGGCATGTTGCAACGGGTCTGGCGATTAGTTCCAACACTGTGTTCGCAGAAGATGAAACAACTAGAGCGTCTTCTGCTAATGACAGTGGGAGTGGCTTAATTGGATTAAGCAAAGTTGAGGATGGCTCTGTAGTATCAAATATACATACGGCAAAATGGAGACTCTTCACAGATAAAGCGAGGGAGTTTTTCCTACAGGGAAAACTAGATGAAGCTGAAAAGCTCTTCCTTTCTGCTTTAGAACAAGCTAAAGAAGGTTTTGGTCAGAGAGATCCACATGTTGCGTCTGCATCCAACAATCTGGCAGAGTTGTACCGGGTCAGAAGGGCATTTGACAAAGCAGAACCCTTGTATTTGGAAGCTATTAACATATTAGAGGAATCTTTTGGTCCCGATGATATACGGGTTGGGACTGCTGCTCACAACCTTGGACAGTTCTACCTTGGACAGCGGAAGATGGAAAAAGCTCGCCTTAACTATGAGCGCGCTTTGAAGATAAAAAGGCGTGTTCTGGGATATGGCCATTCAGAGTGTGCAGATACAATGTATCATCTAGGAGTGGTGCTGTATCTTCAAGGAAAAGAAAGGGATGCCGAGGCCCTCATTCAGGACTCTATAAAGATGCTAGAGGAAGGTGATGAAGGGGAGTCAACTGTATGCATTAGAAGGCTTCGATACCTCTCACAGATGTATTTGAAGTCACACCGTCTCGCTGATGCTGAGATGATCCAGAGAAAGATCCTGCATATCATGGAATTGTCGAAGGGATGGAATTCCTTGGACACAGTAGTTGCAGCTGAATCTTTGGCTCTGACACTGCATGCATCTAGCAATATAAAAGATTCAAAAGAGCTTCTTGAAAGATGTCTTAATGCGCGGAAAGCCTTACTTCCTGGTGACCACATTCAGATTTGTGGAAATTTACTTCATTTAGCAAGGGTGGCAATGCTTGATTTTAGCCAACATAAAAAATTGGATGTTTCTAGAGCTAAAGATGAGCTTGATATGGCAAGGGATCATTTACATAATTCCATAAGGATAGCACGCCAACGTTTAGATAAGTTATCGAAACAAAAAGAAAGGTCAAAGAAATACAGTGCGCCGGGTGATTCCAGAAAGGAACGCCACGCAGCACTGATTATATTGTTGCAATCACTCAGCACCTTGTCATCGGTTGAATTTGCTAAGCAAGAATTGCAGAAGACTCAGGAAGGGAATATTAACCTTGAGGCTAAAGAGGCACTTCTTCAATGCATCTCTGTTTACAAGGAGTTTGCACATGACAAGTTAATTGCTGATTCCCCTGAAATAAAGAATGAGTATCTTTCATGTTTAAAACGTGCTCAAAAACTGGTTGGTAATTATAAACTCGATGAAGAACTAGACAATCAAAAGGATTTTCAGAATCTGAACCAAAAATCTTGA 1593 0.4131 MFLRVTASNLLRKLRFPSSHSFSFSEKFKLFSGYQTQTSGWRVLNQRDPFLWILISGHVATGLAISSNTVFAEDETTRASSANDSGSGLIGLSKVEDGSVVSNIHTAKWRLFTDKAREFFLQGKLDEAEKLFLSALEQAKEGFGQRDPHVASASNNLAELYRVRRAFDKAEPLYLEAINILEESFGPDDIRVGTAAHNLGQFYLGQRKMEKARLNYERALKIKRRVLGYGHSECADTMYHLGVVLYLQGKERDAEALIQDSIKMLEEGDEGESTVCIRRLRYLSQMYLKSHRLADAEMIQRKILHIMELSKGWNSLDTVVAAESLALTLHASSNIKDSKELLERCLNARKALLPGDHIQICGNLLHLARVAMLDFSQHKKLDVSRAKDELDMARDHLHNSIRIARQRLDKLSKQKERSKKYSAPGDSRKERHAALIILLQSLSTLSSVEFAKQELQKTQEGNINLEAKEALLQCISVYKEFAHDKLIADSPEIKNEYLSCLKRAQKLVGNYKLDEELDNQKDFQNLNQKS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0521 530 Gene3D Tetratricopeptide repeat domain 112 275 IPR011990 GO:0005515
Lal3g0521 530 SMART tpr_5 193 226 IPR019734 GO:0005515
Lal3g0521 530 SMART tpr_5 235 268 IPR019734 GO:0005515
Lal3g0521 530 SMART tpr_5 151 184 IPR019734 GO:0005515
Lal3g0521 530 SMART tpr_5 109 142 IPR019734 GO:0005515
Lal3g0521 530 SUPERFAMILY TPR-like 231 348 IPR011990 GO:0005515
Lal3g0521 530 ProSiteProfiles TPR repeat profile. 193 226 IPR019734 GO:0005515
Lal3g0521 530 Coils Coil 448 468 - -
Lal3g0521 530 Coils Coil 394 414 - -
Lal3g0521 530 Pfam Tetratricopeptide repeat 120 183 - -
Lal3g0521 530 Pfam Tetratricopeptide repeat 193 267 - -
Lal3g0521 530 Gene3D Tetratricopeptide repeat domain 276 418 IPR011990 GO:0005515
Lal3g0521 530 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 526 - -
Lal3g0521 530 SUPERFAMILY TPR-like 109 254 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0521 - - lang:109345134 852.047