Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal3g0143 | ATGGATCAAAGAAGTGCATTGGATAAGGATACAGAAGTTGATCTTGAAAGTGGAATGCCACTAATAGGAGATGATTCAATGAAAGTTTCTACTCCAGGTACTTCGAAACAAGGGAGGACATTATTATCTAAAATTTCTGGTTGCTTTGTTAGAGGTTCTGTAAACAGTGAAGACAGGCCAAGTTTACACAATGAATCAAATTTAAGTGAAGTTTCTGTGGATGAGGTGGAACTGGAAAACAAGCCAATGATGGGACAGGACTCAGTGAGGCATGCAGAGAAGTCCCTGGTAAAGGAGAAACGTAAAAAGGCTAGTAATAAAAAGGCAGCGAAACCTCCACGACCTCCACAAGCTCCAACATTAGATGCAGCTGACCGTAAGCTAATAAGAGAGATATCTAAACTCGCTATGTTGAAGCGTGCAAGGGTAGAGCGAATGAAATCCTTGAAGAAGATGAAAGCTGCCCAATCTTCATCATCTTCCAATAGCAGCACCTGGGCCATGATTCTTACTGTTGTCTTCGTAATTGTGATAATAATCCAAGGTTTGTCATCTGGAAAAAGTCCAGAAGCAACTTTCCAGGGATCTCCTTTATCTGCAAGTGGAACAGAGAATGGTTTAATTTCAGTTCAGTATCAACTCAATCCATCTACAAGTGACTCAAATGCACCTGGTTCAGAGTCTCATAAGTAA | 693 | 0.4069 | MDQRSALDKDTEVDLESGMPLIGDDSMKVSTPGTSKQGRTLLSKISGCFVRGSVNSEDRPSLHNESNLSEVSVDEVELENKPMMGQDSVRHAEKSLVKEKRKKASNKKAAKPPRPPQAPTLDAADRKLIREISKLAMLKRARVERMKSLKKMKAAQSSSSSNSSTWAMILTVVFVIVIIIQGLSSGKSPEATFQGSPLSASGTENGLISVQYQLNPSTSDSNAPGSESHK | 230 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal3g0143 | 230 | MobiDBLite | consensus disorder prediction | 74 | 100 | - | - | |
| Lal3g0143 | 230 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Lal3g0143 | 230 | PANTHER | OS01G0299500 PROTEIN | 1 | 229 | - | - | |
| Lal3g0143 | 230 | MobiDBLite | consensus disorder prediction | 57 | 73 | - | - | |
| Lal3g0143 | 230 | MobiDBLite | consensus disorder prediction | 52 | 125 | - | - | |
| Lal3g0143 | 230 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 229 | - | - | |
| Lal3g0143 | 230 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal3g0143 | Lal-Chr3 | 914326 | 918258 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal3g0143 | - | - | gmx:100778592 | 228.794 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal5g1651 | 5 | 18808722 | 18811590 | Lal3g0143 | 3 | 914326 | 918258 | LSH | |
| Lal3g0143 | 3 | 914326 | 918258 | Lal11g0280 | 11 | 1980539 | 1983697 | LSH | |
| Lal14g1589 | 14 | 16429219 | 16430479 | Lal3g0143 | 3 | 914326 | 918258 | PCT | |
| Lal7g0985 | 7 | 16127433 | 16129905 | Lal3g0143 | 3 | 914326 | 918258 | PCT | |
| Lal3g0143 | 3 | 914326 | 918258 | Lal14g1589 | 14 | 16429219 | 16430479 | PCT | |
| Lal3g0143 | 3 | 914326 | 918258 | Lal7g0985 | 7 | 16127433 | 16129905 | PCT |