Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1905 ATGAACACTGTTACTTCTTCTCTCTCTATAAATCCCACTTTCTCCCCTTCAATTCTCTCAATTCCCACTTCTTCTTCTTCTTCATGTTCATATTCATACCATTACCTTCCCAATTCCTTTGGACCAAAACCCATTATTCTTTCTTGCAAAGAAGCGCGATTGTGCTCTTTGCAGGGACCAAAAAGTTTGAAAATTAGAAAAAGATTCGTACTTGAAGCTACAAACATGAGTGTGGAAGAGTTTGATTTGCATAATGAGAAGGGGGAAGAAGAGGGTACTCCTAATTCTGCTTTGCTTGACTCTGGAAAAGTTTCAAAGCCTAGAAGAATTGCACTCTTTGTTGAACCTTCTCCTTTTTCATATGTCTCAGGATACAAAAACCGCTTTCAAAATTTTATTAAATACCTCCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACACATAAAGGACTTCCTGAAGAATTTCATGGAGCCAAATTAATTGGATCCAGGAGCTTTCCCTGTCCTTGGTATCAGAAGGTACCCCTCTCCTTAGCACTTAGTCCGAGAATAATTTCAGAGGTAGCTCAGTTTAAGCCTGATATAATACATGCATCATCTCCAGGCATAATGGTTTTCGGTGCCCTTATCATTGCAAAACTTTTGTCCGTTCCTATTGTCATGTCCTATCATACCCATGTACCAGTGTACATTCCAAGATATACCTTTAGCTGGCTGGTGAAACCCATGTGGTGGGTCATAAAATTTCTCCACACAGCAGCTGATCTGACTTTGGTGCCATCAGCTGCCATTGGAAGGGAACTCCAAGCTGCTAAAGTAACAGCAGCTAACAGGATTCGTCTTTGGAATAAGGGTGTTGATTCTGATAGTTTCCATCCTCGATACCGCTCGGATGAAATGCGATTAAGACTAAGCAATGGTGAACCCGAGAAACCCTTGATAGTTCATGTTGGACGGCTAGGATTTGAGAAGAGTTTGGATTTTATCAAAAGGATCATGGATAGGCTTCCTGAAGTTCGAATTGCTTTTATTGGAGATGGCCCATACAGGGAGGGGCTGGAGAAAATGTTTGAAGGTATGCCTGCAGTGTTCACCGGAATGTTAGGAGGGGAAGAACTCTCTCAAGCATATGCGAGTGGAGATGTTTTTGTCATGCCTTCCGAGTCAGAAACACTTGGCCTCGTTGTTTTGGAGGCAATGTCTTCAGGGATTCCTGTGGTAGGAGCACGTGCCGGAGGAATTCCAGATATAATCCCTGCAGAACAAGAGGGCAAAACTGGCTATCTATATAATCCGGGCAACCTTGATGACTGCTTAAGCAAATTAAAGCCTCTGTTGTTCGATAAAGAGTTCAGAGAACACATGGGAAAAGCCGCACGTAAAGAGATGGAAAAGTACGATTGGAAGGCAGCCACTCACAACATTCGCAACGAGCAATACAACGCTGCGATTTGGTTCTGGCGAAAGAAAAGAGCTCAACTATTGAGACCCTTTCAATGGTTGACAAAACGTATTTTCCCATCACCAGCAGTCAACTATAGGTGA 1548 0.427 MNTVTSSLSINPTFSPSILSIPTSSSSSCSYSYHYLPNSFGPKPIILSCKEARLCSLQGPKSLKIRKRFVLEATNMSVEEFDLHNEKGEEEGTPNSALLDSGKVSKPRRIALFVEPSPFSYVSGYKNRFQNFIKYLREMGDEVMVVTTHKGLPEEFHGAKLIGSRSFPCPWYQKVPLSLALSPRIISEVAQFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVKPMWWVIKFLHTAADLTLVPSAAIGRELQAAKVTAANRIRLWNKGVDSDSFHPRYRSDEMRLRLSNGEPEKPLIVHVGRLGFEKSLDFIKRIMDRLPEVRIAFIGDGPYREGLEKMFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPAEQEGKTGYLYNPGNLDDCLSKLKPLLFDKEFREHMGKAARKEMEKYDWKAATHNIRNEQYNAAIWFWRKKRAQLLRPFQWLTKRIFPSPAVNYR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1905 515 Gene3D Glycogen Phosphorylase B; 287 467 - -
Lal2g1905 515 Pfam Glycosyltransferase Family 4 127 290 IPR028098 -
Lal2g1905 515 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 23 514 - -
Lal2g1905 515 Pfam Glycosyl transferases group 1 310 462 IPR001296 GO:0016757
Lal2g1905 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 110 476 - -
Lal2g1905 515 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 23 514 - -
Lal2g1905 515 Gene3D Glycogen Phosphorylase B; 123 471 - -
Lal2g1905 515 CDD GT4-like 109 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1905 Lal-Chr2 21284284 21288796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1905 28 423 Glycosyltransferase AT5G01220 72.040 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1905 K06119 - gmx:100780899 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1905 2 21284284 21288796 Lal2g1905 2 21284284 21288796 ECH
Lal2g1905 2 21284284 21288796 Lal14g0224 14 2614082 2618720 PCT
Lal14g0224 14 2614082 2618720 Lal2g1905 2 21284284 21288796 PCT