Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1892 ATGGTGGGTGGTGGAAACTCCAATTCAGATATCTCCTTTGCTGGCACTTTTGCCGCCAGTGCCTTTTCTGCATGTTTTGCCGAGATTTGTACTATTCCTTTGGACACTGCCAAAGTCAGGCTTCAGCTTCAAAAGCAAGCTGTAGGTGATGCAGTCATACCTAAATATAAGGGTATGCTAGGAACAGTTGGAACCATTGCCAGGGAAGAAGGCCTTTCATCACTTTGGAAGGGGATTGTGCCAGGGCTACACCGTCAATGTTTGTATGGAGGCTTAAGAATTGGGTTATATGAGCCTGTTAAGAATTTGTATGTGGGGAGTGACCATGTCGGAGATGTTCCATTGTCGAAGAAAGTTCTTGCTGCACTGACAACTGGTGCTGTGGCAATCGCGGTGGCAAATCCAACCGATCTTGTGAAAGTTAGACTTCAAGCAGAAGGAAAATTACCTGCTGGTGTGCCCAGGCGTTATTCTGGATCATTGAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGCTGCTCTTTGGACTGGGATTGGTCCCAATATAGCAAGAAATGCTATCATCAATGCTGCCGAACTAGCCAGCTACGATCAAGTGAAACAGACTATTTTGAAAATTCCAGGCTTCACTGATAATGTCGTAACTCATCTTCTTTCTGGTCTAGGAGCAGGGTTTTTCGCAGTCTGTATTGGTTCCCCGGTTGATGTGGTCAAGTCGAGAATGATGGGGGATCCTAGTTACAAAAGCACCCTTGATTGTTTCGTCAAAACATTAAAAAATGATGGAATTTTAGCCTTTTATAAGGGGTTCATACCAAATTTTGGACGGCTCGGATCGTGGAATGTGATTATGTTTTTAACTCTAGAACAGACTAAAAAGTTCGTCAAAGGTTTAGAATCAGCCTGA 912 0.4364 MVGGGNSNSDISFAGTFAASAFSACFAEICTIPLDTAKVRLQLQKQAVGDAVIPKYKGMLGTVGTIAREEGLSSLWKGIVPGLHRQCLYGGLRIGLYEPVKNLYVGSDHVGDVPLSKKVLAALTTGAVAIAVANPTDLVKVRLQAEGKLPAGVPRRYSGSLNAYSTIVRQEGVAALWTGIGPNIARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFFAVCIGSPVDVVKSRMMGDPSYKSTLDCFVKTLKNDGILAFYKGFIPNFGRLGSWNVIMFLTLEQTKKFVKGLESA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1892 303 SUPERFAMILY Mitochondrial carrier 10 292 IPR023395 -
Lal2g1892 303 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 5 297 - -
Lal2g1892 303 Pfam Mitochondrial carrier protein 112 207 IPR018108 -
Lal2g1892 303 Pfam Mitochondrial carrier protein 214 297 IPR018108 -
Lal2g1892 303 Pfam Mitochondrial carrier protein 10 105 IPR018108 -
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 44 63 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 97 109 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 167 184 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 210 228 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 PRINTS Mitochondrial brown fat uncoupling protein signature 285 303 IPR002030 GO:0006839|GO:0031966
Lal2g1892 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Lal2g1892 303 Gene3D Mitochondrial carrier domain 14 301 IPR023395 -
Lal2g1892 303 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 5 297 - -
Lal2g1892 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 204 IPR018108 -
Lal2g1892 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1892 Lal-Chr2 21204056 21207822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1892 1 303 Miscellaneous Gene Families AT3G54110 81.639 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1892 K15103 - gmx:100809667 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1892 2 21204056 21207822 Lal2g1892 2 21204056 21207822 ECH
Lal2g1892 2 21204056 21207822 Lal14g0245 14 2819623 2824486 PCT