Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1011 ATGCAAGTGCAACTTCACTTCTCCATTTCATTTACAACACTAGCTATGTTCCTTGTTAAGACTTGGAGATCAACGGCGTTTGGTCTTTATGGCTACCTCAATTTCACCAAATCTGCTTACCTTGATCATTCAAAGAATTTCAAAGCAGAGGAAATGGAAACACTAATGCCAGGGAAAAATTGCATTGTTACGGGAGCTAACTCTGGAATTGGCTACTCAACAGCCGAGGGTTTAGCACAGCGTGGTGCAACCGTCTATCTTGTGTGCCGTAACAAGGATAGAGGAGAGGCTGCTCTTTCTCAAATTCAAACTAAAACTGGCAATCAAAATGTATACTTGGAGATTTGTGACCTTTCATCTGTCGCAGAGATCAAGTCGTTCGCTTCCAGGTTTTCTGAAAAGAATGTGCCAGTTCATGTGTTGTCTAATTCGGAAGTAGTTTCTTGCTTCAAGGTTAACAATGCTGGTGTGCTTGAGCAAAACCGAATTACCACATCAGAAGGGTTCGAGTTCAACTTTGCTGTAAATGTATTAGGCACTTATGCCATCACAGAATTGATGGTACCATTACTGGAGAAAGCTTCCCCTGATGCACGTGTGATTACAGTTTCTTCTGGTGGAATGTATAGTACTCCCTTGACCACAGATCTACAGTATTCTGAGAACTTCAATGGGGTTGAACAGTATGCTCGAAACAAGCGTATTCAGGTTGCATTAACTGAAACGTGGGCTGACAAATATAAGAATAAAGGAATAGGATTTTACTCAATGCATCCAGGCTGGGCTGAGACTCCTGGGGTTGCTAAGAATTTACCAAGCTTCTCTAAATCGCTTTCAGGGAAGCTTAGAACAAGTGAAGAAGGTGCAGACACAGTTATCTGGTTAGCATTACAACCAAAGGAGAAACTCGTATCAGGTGCATTTTATTTTGATAGAGCTGAAGCTCATAAGCACCTTGCATTTGCTGCCACCCGTGGTTCCCATGCTTCGATCAACTCTGTGGTTGGTAGTCTCAACTCAATGGCTTCCCTTTTTGTCTAA 1041 0.4227 MQVQLHFSISFTTLAMFLVKTWRSTAFGLYGYLNFTKSAYLDHSKNFKAEEMETLMPGKNCIVTGANSGIGYSTAEGLAQRGATVYLVCRNKDRGEAALSQIQTKTGNQNVYLEICDLSSVAEIKSFASRFSEKNVPVHVLSNSEVVSCFKVNNAGVLEQNRITTSEGFEFNFAVNVLGTYAITELMVPLLEKASPDARVITVSSGGMYSTPLTTDLQYSENFNGVEQYARNKRIQVALTETWADKYKNKGIGFYSMHPGWAETPGVAKNLPSFSKSLSGKLRTSEEGADTVIWLALQPKEKLVSGAFYFDRAEAHKHLAFAATRGSHASINSVVGSLNSMASLFV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1011 346 PANTHER RETINOL DEHYDROGENASE 22 336 - -
Lal2g1011 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 312 IPR036291 -
Lal2g1011 346 Pfam short chain dehydrogenase 59 269 IPR002347 -
Lal2g1011 346 Gene3D - 44 332 - -
Lal2g1011 346 PRINTS Glucose/ribitol dehydrogenase family signature 60 77 IPR002347 -
Lal2g1011 346 PRINTS Glucose/ribitol dehydrogenase family signature 229 248 IPR002347 -
Lal2g1011 346 PRINTS Glucose/ribitol dehydrogenase family signature 250 267 IPR002347 -
Lal2g1011 346 PRINTS Glucose/ribitol dehydrogenase family signature 278 298 IPR002347 -
Lal2g1011 346 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 22 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1011 Lal-Chr2 6912912 6916871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1011 56 265 Miscellaneous Gene Families AT2G29340 30.455 7.56e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1011 K11168 - gmx:100775215 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1011 2 6912912 6916871 Lal2g1011 2 6912912 6916871 ECH