Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0980 ATGGCGAATATTACAGAAGAAGAGAGCGCAGTGAAGGAGCCTTTGGATCTCATCAGGCTCAGCCTTGACGAACGTATCTACGTCAAGCTCCGTTCTGATCGAGAGCTTCGTGGAAAGCTTCATGCTTATGATCAACATCTTAATATGATTCTTGGTGAGGTTGAAGAAATTGTTACTACCGTGGAAATCGATGATGAGACATATGAAGAAATTGTGAGGACTACAAAGCGAACAGTACCTTTCCTGTTTGTTAGAGGAGATGGAGTGATACTGGTTTCCCCACCACTGAGGACTGCATAA 300 0.4367 MANITEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGEVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0980 99 SMART Sm3 16 94 IPR001163 -
Lal2g0980 99 SUPERFAMILY Sm-like ribonucleoproteins 13 95 IPR010920 -
Lal2g0980 99 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 5 99 IPR040002 GO:0003723
Lal2g0980 99 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 5 99 - -
Lal2g0980 99 CDD LSm3 13 94 IPR034105 GO:0000398|GO:0003723
Lal2g0980 99 Gene3D - 4 96 - -
Lal2g0980 99 Pfam LSM domain 18 94 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0980 Lal-Chr2 6625591 6628907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0980 K12622 - gmx:100499782 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0980 2 6625591 6628907 Lal2g0980 2 6625591 6628907 ECH