Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0969 ATGTCTCAGGTTATTGCTACAGGATCCATTCATGGCACCCTTTTATCCCCTGGTTCTTGTTCTTCATATGAAAGGGCTCAAAAGCTCTTAAAGCCTGCAACTTTTTCTTCCATTGTGTTCCAATCAAAAGGGAACAAGTGCTCCCAAATTGGTTTCAAAAGCTTCCATGTCAGTGCAAGAAAATCTGCACCAGTGAATGTTGTCCCTGTGTCACCTGAGGATGATTCAAAGATTGAGGAGCATTTGCAGCATTTGCGTGGTGTGCAGAAATTTGGTGATGATTCTGCTGGAATGTGGTCAAAGCCGACATTTAGGCGCAAGACAAAGATAGTGTGTACTATTGGTCCTTCTACCGATACTAAGGAAATGATATGGAAGCTGGCTGAGGCTGGAATGAATGTGGCTCGCCTCAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTAATTGACTTGGTTAAAGAATATAATGCACAATCCAAGGACAATGTCATCGCTATTATGCTTGACACGAAGGGTCCTGAAGTTAGGAGTGGTGATTTGCCCCAACCAATCCTATTAAATAGTGGGCAGGAATTTACTTTTACTATTCAAAGAGGTGTTGGAACTACAGATTGTGTCAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAGTTGGGGATATGATTCTTGTTGATGGTGGTATGATGTCTTTCTTGGTTACATCTAAGACAGAAGATTCTGTAAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGCGACATTTGAATGTTAGAGGAAAAAGTGCAACACTGCCTTCAATTACTGAGAAGGATTGGGATGATATCAAATTTGGAGTGGATAACCAAGTTGACTTCTATGCTGTTTCATTTGTTAAGGACGCTGAAGTAGTTCATGAACTGAAGAATTATTTGAAAAGCTGTGGTGCTGATATACATGTCGTAGTAAAAATTGAAAGTGCCGACTCTATTCCAAACTTGCATTCAATTATCACTGCATCCGATGGGGCTATGGTTGCCCGAGGGGATCTTGGTGCCGAGCTCCCTATTGAGGAGGTTCCGCTTTTGCAGGAAGAGATAATCAGCTTGTGCCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTGGAAAGTATGATTGTTCACCCAACACCAACCAGAGCAGAGGTATCGGATATTGCAATTGCTGTCCGAGAAGGTTCTGATGGAATAATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACTATACATGGTGGACAATTGCCACCTAACATCGGTCAAGTGTTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATCATGTCTAATACTCTTGGAACCTCAACAGTTGTCTTCACTAGAACAGGTTTCATGGCTATCCTACTGAGCCACTATCGACCTTCTGGCACCATATTTGCTTTCACGGATGAGAAGAGGGTAAAACAGAAGCTGGCTTTGTATCAAGGAGTCTGTCCTATATACATGGAATTCTGCGATGATGCTGAAGCGACTTTCATCAGAGCCTTGGATTTTCTGAAGGAACAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGCAGACAACCAATATGGAGGTTCCAATCCACTCATAATATCCAGGTCCGAAAAGTGTAA 1728 0.4248 MSQVIATGSIHGTLLSPGSCSSYERAQKLLKPATFSSIVFQSKGNKCSQIGFKSFHVSARKSAPVNVVPVSPEDDSKIEEHLQHLRGVQKFGDDSAGMWSKPTFRRKTKIVCTIGPSTDTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPILLNSGQEFTFTIQRGVGTTDCVSVNYDDFVNDVEVGDMILVDGGMMSFLVTSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAEVVHELKNYLKSCGADIHVVVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIISLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIHGGQLPPNIGQVFKNHMSEMFAYHATIMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVKQKLALYQGVCPIYMEFCDDAEATFIRALDFLKEQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0969 575 TIGRFAM pyruv_kin: pyruvate kinase 106 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Lal2g0969 575 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 Pfam Pyruvate kinase, alpha/beta domain 468 555 IPR015795 -
Lal2g0969 575 PANTHER PYRUVATE KINASE 46 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PANTHER PLASTIDIAL PYRUVATE KINASE 2 46 575 - -
Lal2g0969 575 Gene3D - 448 575 IPR036918 -
Lal2g0969 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Lal2g0969 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Lal2g0969 575 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Lal2g0969 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal2g0969 575 Gene3D - 108 433 IPR040442 -
Lal2g0969 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 99 440 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0969 Lal-Chr2 6514224 6519850 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0969 K00873 - gmx:100803036 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0969 2 6514224 6519850 Lal2g0969 2 6514224 6519850 ECH