Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0962 ATGGAACAGAAGAACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGGCTTGGATTGAGTTCAGGTCAGAAATGGGTTGGAGGGAGTGGTGATTATGATGAGATTTCTGAGGAGCAGATTGTAGTGGAGCTCAAAAATCATGTGGTTGATGGGAAAGATAGCAAAGTTACATTTGATCACTTTCCTTATTACTTAAGCGAAAGAACTCGAGCTTTGATGTCAAGTGCTGCATATGTTCATTTGAAAAGTCAAGACTTCTCCAAGCACACCCGAAACCTCTCACCAGCGAGCAGGGCTATTTTGCTCTCTGGTCCTACAGAAATTTACCAGCAATCGCTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTTGCTAGATATTACAGACTTCTCCTTGAAGATTCGGCGTAAATATGGGTGTTCAAGAAAAGAACCATCTTTTAGAAGGTCCATATCCGAGGTGACTTTGGAGCGAATGTCTGGCTTGTTTGGTTCCTTTTCCATCCTCCCTTCAACCGGCGAAACTAGAGCTCCTTTAAAGCACACAAACATCTTGTGTTTTGACGAAAAGGTCTTCGTGCAGTCACTTTACAAGGTTATAGTTTCTATCTCAGAAAATGGTTCCATCATTTTATACATCAGTGAAGTTGAGAAACTCATTCTCCAATCACCAAGTTTATACAATTTATTACAAAAAATGATAAAGAAACTTTCAGGCTCTGTGTTAATACTCGGTTCCCAGATAGTAGATTCACAAGATGATTGCAAAGAAATTGATGAAAGGCTCAATATGTTATTCCATTACAACATTGAGATCAAACCCCCAGAAGATGAAGCTCATCTTGGCAGCTGGAAAGCCCAACTGGAAGAGGATATGAAAGCTCTTCAATTTCGAGATAATAGAAACCACATCGCAGAAGTACTTGAAGCAAATGACATTGACTGTTATGACTTGACTTCAATATGCCATGCAGACACTACGATAATCAGTAATTATATTCAAGAAATTGTGGTGTCAGCAATATCTTACCATTTGATGAATACCAAGGATCCAAAATACCATAATGGAAAGCTAATTATATCAGCCACGAGTTTGTCCCATGGATTGAATCTGTTCCAGGAAGGCAAAAGTAGTGGAAATCTGAAGACTAATGAACCTATCAAGGATAACTCCGGTAATGATGTGCAGAGTGACAACCAAGCTCCTGAAAACAAAAATGAGACGGAGAAGTCTGTCCCTATGACGAAGAAAGATGCCGAGAATCCTGCTGCAGCAAAATCAGAAAGCCAAGAAACGATGTTTCGTTCGCTTGTAGACCTTCTGGAAGTTATTGACAATGTGCTTGAAAAACGCATAACACCAGATGTTATCCCCGAAAATGAGATAGGGGTTACATTTGCAGATATTGGATCATTGGATGATATTAAAGAATCACTTCAAGAGTTGGTCATGCTTCCCCTTAGAAGACCAGACCTCTTTAAAGGTGGCCTTCTAAAGCCATGCAGAGGCATATTGCTTTTTGGACCACCTGGTACTGGAAAAACAATGCTAGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATGTCCACCATCACTTCAAAATTTTTTGGCGAAGATGAAAAGAATGTTCGAGCCCTATTCACACAAGCAGCGAAGGTTGCCCCAGCTATTATCTTTGTCGATGAGGTTGACAGCATGCTTGGCCAGCGGACTATTGGAGAGCACGAGTCCATGCGGAGGATTAAAAATGAATTCATGACCCACTGGGATGGGCTATTAACAAGACCTGGTGAGCAAATTATGGTTCTTGCTGCTACAAACAGACCATTTGACCTTGATGAAGCAATTATAAGACGATTTGAGCGCAGGATAATGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCCTAAAAACTCTTCTAGCTAAGGAAAAACATGAAAACTTAGACTTCAAGGAACTCGCAACCATGACAGAAGGATTTAGTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCCGTTAGGGAGCTAATAGAGCAGGAGAGAAGGAAGGACATGGAAAAGAAGAAAAAAGAACCACAAGGCCAAGGCTCTGAAGATTCTTCGAGCAAAGAAGAAGATAAAGAAGAACTAGAAATTATTCTTAGGCCATTAAATATGGAAGACATGAGACAGGCTAAGAGTCATGTCGCTGCAAGTTTTGCTTCGGAAGGAGCAGTAATGGGTGAGCTGAAGCAGTGGAATGATTTGTACGGAGAAGGAGGTTCAAGGAAGAAAGAAGAGCTCACCTACTTTTTTTAG 2355 0.4115 MEQKNVLLSALSVGVGLGVGLGLSSGQKWVGGSGDYDEISEEQIVVELKNHVVDGKDSKVTFDHFPYYLSERTRALMSSAAYVHLKSQDFSKHTRNLSPASRAILLSGPTEIYQQSLAKALAHCFESKLLLLDITDFSLKIRRKYGCSRKEPSFRRSISEVTLERMSGLFGSFSILPSTGETRAPLKHTNILCFDEKVFVQSLYKVIVSISENGSIILYISEVEKLILQSPSLYNLLQKMIKKLSGSVLILGSQIVDSQDDCKEIDERLNMLFHYNIEIKPPEDEAHLGSWKAQLEEDMKALQFRDNRNHIAEVLEANDIDCYDLTSICHADTTIISNYIQEIVVSAISYHLMNTKDPKYHNGKLIISATSLSHGLNLFQEGKSSGNLKTNEPIKDNSGNDVQSDNQAPENKNETEKSVPMTKKDAENPAAAKSESQETMFRSLVDLLEVIDNVLEKRITPDVIPENEIGVTFADIGSLDDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKFFGEDEKNVRALFTQAAKVAPAIIFVDEVDSMLGQRTIGEHESMRRIKNEFMTHWDGLLTRPGEQIMVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIEQERRKDMEKKKKEPQGQGSEDSSSKEEDKEELEIILRPLNMEDMRQAKSHVAASFASEGAVMGELKQWNDLYGEGGSRKKEELTYFF 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0962 784 MobiDBLite consensus disorder prediction 410 431 - -
Lal2g0962 784 CDD AAA 509 641 - -
Lal2g0962 784 Pfam ATPase family associated with various cellular activities (AAA) 511 640 IPR003959 GO:0005524|GO:0016887
Lal2g0962 784 Gene3D - 470 641 IPR027417 -
Lal2g0962 784 ProSitePatterns AAA-protein family signature. 613 632 IPR003960 GO:0005524|GO:0016887
Lal2g0962 784 Gene3D - 33 301 IPR027417 -
Lal2g0962 784 MobiDBLite consensus disorder prediction 383 437 - -
Lal2g0962 784 SMART AAA_5 507 643 IPR003593 -
Lal2g0962 784 Gene3D - 642 712 - -
Lal2g0962 784 Pfam AAA+ lid domain 662 706 IPR041569 -
Lal2g0962 784 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 188 - -
Lal2g0962 784 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 187 784 - -
Lal2g0962 784 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 187 784 - -
Lal2g0962 784 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 188 - -
Lal2g0962 784 MobiDBLite consensus disorder prediction 383 409 - -
Lal2g0962 784 MobiDBLite consensus disorder prediction 700 732 - -
Lal2g0962 784 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 702 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0962 Lal-Chr2 6449429 6455211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0962 471 699 Calmodulin-binding Proteins AT3G56690 40.000 7.64e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0962 - - gmx:100817952 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0962 2 6449429 6455211 Lal2g0962 2 6449429 6455211 ECH
Lal2g0962 2 6449429 6455211 Lal9g0851 9 6255110 6263473 LSH