Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0928 ATGGTAATGGCTTCCATTTCTCTTCTTCTCACTCTCTCCCTCATTGCCTCTTCTCTCCACACCTCTTTTTCCGACAGCAGGAAAGAATTGAGGAACAAGGATTTGTTGAAGAAGGAAAATGCATTCAAGCAGCAATTAGAGAACACAGTTTATCCCAACAGAATTGATCCATCACGTGCTGTTCAAATCTCTTGGCAACCAAGGGTCTTTCTGTACAAAGATTTTATGTCGGACAAAGAGTGTGACTACCTTATTTCTTTGGCACATTCTGTAAAAGAAAAATCTTCAGGGAATGAAGATGTTGCTGCAAATGAGAGGCTTACCTCTGAAATTTCATTGGATGTAGAGGATGATATTGTTGCAAGGATTGAAGAAAGAATATCGGTCTGGACTTTTCTTCCTAAAGAGAACAGCAAGCCTTTGCAAGTCATGCATTATGGGGTCGAGCAAGATGGACAGAACTTAGATTATTTTTCAAACAAAACCAAATTGGAATTAAGTGAACCTTTAATGGCAACAGTTGTTTTGTATCTCTCAAATGCTACTCAAGGGGGTCAAATTCTGTTTCCTGAATCTCAGTGGAAGAGTAGCAGCTGGTCTGATTGTGGAAAAAGTAATGAGATCCTCCAACCTGTAAAAGGGAATGCTATTCTGTTCTTCTCTCTTCATATGAACACAGCTCCTGACAAGAGTAGTTTCCATGCAAGATGCCCCATCCTTAAGGGTGATATGTGGTCTGCAATCAAATTCTTCTCAATAAGATCAATTAGTAGAAGGAATGTCTCAACCATATCTTATGATGATTGTACTGATGAGGATGACCAATGTCCTGCTTGGGCAGCCACAGGAGAATGTCAACGAAATCCTGTATACATGGTTGGTTCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAATGCATGCTGA 930 0.3978 MVMASISLLLTLSLIASSLHTSFSDSRKELRNKDLLKKENAFKQQLENTVYPNRIDPSRAVQISWQPRVFLYKDFMSDKECDYLISLAHSVKEKSSGNEDVAANERLTSEISLDVEDDIVARIEERISVWTFLPKENSKPLQVMHYGVEQDGQNLDYFSNKTKLELSEPLMATVVLYLSNATQGGQILFPESQWKSSSWSDCGKSNEILQPVKGNAILFFSLHMNTAPDKSSFHARCPILKGDMWSAIKFFSIRSISRRNVSTISYDDCTDEDDQCPAWAATGECQRNPVYMVGSPDYYGTCRKSCNAC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0928 309 SMART ShkT_1 268 309 IPR003582 -
Lal2g0928 309 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 3 309 IPR045054 -
Lal2g0928 309 Gene3D q2cbj1_9rhob like domain 60 252 - -
Lal2g0928 309 ProSiteProfiles ShKT domain profile. 269 309 IPR003582 -
Lal2g0928 309 SMART p4hc 67 252 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lal2g0928 309 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 3 309 - -
Lal2g0928 309 Pfam 2OG-Fe(II) oxygenase superfamily 142 251 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0928 Lal-Chr2 6239893 6243689 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0928 K00472 - gmx:100795761 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0928 2 6239893 6243689 Lal2g0928 2 6239893 6243689 ECH