Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0924 ATGGGGACATCGGTGCAGGTAACACCACTGTGTGGAGTATACAACGAGAATCCTCTCTCCTATTTGGTCTCCATTGATGGATTCAACTTCCTCATTGATTGTGGCTGGAATGACCACTTTGACCCTTCTCTTCTTCAACCTCTCTCCAAGGTCGCACCAACTATAGATGCTGTCTTGCTTTCACATCCAGATACACTTCACCTTGGTGCTCTTCCATATGCCATGAAGCAGCTTGGACTCTCTGCCCCTGTGTATTCGACAGAGCCTGTCTACAGATTGGGTCTTCTCACTATGTATGACCAATTCCTCTCAAGAAAGCAAGTATCAGAGTTTGATCTGTTCACACTAGATGATATTGATTCTGCGTTCCAAAGTGTAACGAGGCTAACATATTCTCAGAATCATCATCTTACAGGCAAGGGAGAGGGAATCGTGATTGCACCTCATGTTGCTGGACATCTGTTGGGAGGTACTATTTGGAAAATTACAAAGGACGGTGAGGATGTCATATATGCTGTTGATTTTAATCATCGAAAAGAACGGCATTTGAATGGAACTGTTCTAGGTTCTTTTGTGCGTCCAGCTGTTCTAATAACTGATGCGTACAATTCTTTGAACAACCAGCCTTACAGACGTCAAAAGGACAAAGAATTTGGAGATATTTTAAAGAAGACTCTGAGGGCAGGTGGCAATGTATTGCTACCTGTTGACACTGCTGGACGAGTGTTGGAACTTACTCTGATGTTGGAATCGTATTGGGCTGATGAAAACTTGGTTTACCCCATATACTTTCTTACATATGTTGCACCCAGCACAATTGATTATGTGAAGAGTTTCCTTGAGTGGATGAGTGATTCCATCGCAAAGTCCTTTGAACAGACTCGTGAAAATATATTTCTTTTGAAGCACCAAGATGGTGCTCTGATACCAGTGATAGCACTGATACCAGTAAGAAGAAGAGTATACAAGAATGAGTTACAAGGATCCCACGATCCACCGATTCCACAATCAGCCACTGATTCCACAATCAGTTGGTATGTCACACTTCTTACTAACAAGACTGAGCTTGACAATGCTCCAGATGGTCCAAAGGTTGTTATAGCATCCATGGCAAGTTTGGAAGCAGGGTTTTCTCATGATATATTTGTTGAATGGGCGAATGATGTAAAAAATCTCGTGCTTTTTACTGAAAGAGGCCAGTTTGCCACGCTAGCTCGTATCCTTCAGGCTGATCCACCTCCAAAAGCTGTCAAAGTGACTGTGTCCAAGCGAGTTCCTTTGGTTGGGGAAGAGCTAATCGCTTATGAAGAAGAGCAGAATCGAAAAAAGAAAGAAGAAGCTTTAAAAGCCAGTCTTATAAAAGAGGAAGAATTGAAAGCTTCTCACGGGGCGGATAATAATACTAGTGATCCAATGGTTGTTGATACTGGCAATAATCATGTATCACCAGAAGAAGTCCCTTCAATAATTTCATTTGCACTTGCAGTGGCTGGTCCTCGAAATGGGGGATACAGAGACATATTTATTGATGGATTCGTTCCCCCTTCGTCAAGTGTTGCCCCAATGTTTCCCTGCTATGAGAATACATCAGAGTGGGATGATTTTGGTGAAGTCATAAATCCAGATGATTATGTAATTAAGGATGAAGACATGGACCAGGCAGCAATGCATGTAGGTGATATAAATGGAAAACTAGATGAAGGAACTGCAAGTTTGATACTTGATACAAAGCCATCAAAAGTTGTGTCTGATGAAAGGACTGTGCAAGTGAGGTGTTCGTTGGTATACATGGATTTTGAAGGCCGTTCAGATGGAAGATCCATTAAAAATATTCTCTCCCATGTGGCTCCCTTGAAGCTGGTTTTGGTGCATGGGTCAGCTGAAGCTACAGAGCATTTGAAGCAGCATTGCCTGAAGAATGTTTGTCCTCATGTCTACGCTCCCCAAATTGAGGAGACAATTGATGTTACATCTGATTTGTGTGCTTATAAGGTTCAACTATCTGAGAGGCTAATGAGTAATGTACTCTTAAAGAAGATAGGAGATTATGAAGTAGCTTGGGTTGATGCTGAAGTAGGGAAGACAGAAAACGACATGCTTTCTCTGCTCCCGGTTTCTGCTGCAGCTCCTCCACATAAATCTGTTCTTGTCGGTGATTTGAAATTGGCAGATTTCAAGCAGTTCCTCTCCAGCAAGGGTGTTCAGGTAGAATTTGCTGGCGGGGCTTTGCGTTGCGGTGAATATGTAACTCTTCGGAAGGTTGGGGATGCAAGTCAGAAGGCAAGTTCTTCTTCTGAACATTTGGTGGTGGTTCTGGTACTCAGCAAATTGTTATTGAAGGTCCTCTGTGTGAGGATTACTATAAAATTCGTGACTATCTCTATTCACAGTTTTATTTGCTTTAGATTTATTAGTAGGACTTGTGCATGGCAAATCAGCAACTTCTTTGCTTCTCTGCCCTATTTTGTGTGA 2472 0.4223 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVAPTIDAVLLSHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNSLNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAGRVLELTLMLESYWADENLVYPIYFLTYVAPSTIDYVKSFLEWMSDSIAKSFEQTRENIFLLKHQDGALIPVIALIPVRRRVYKNELQGSHDPPIPQSATDSTISWYVTLLTNKTELDNAPDGPKVVIASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFATLARILQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRKKKEEALKASLIKEEELKASHGADNNTSDPMVVDTGNNHVSPEEVPSIISFALAVAGPRNGGYRDIFIDGFVPPSSSVAPMFPCYENTSEWDDFGEVINPDDYVIKDEDMDQAAMHVGDINGKLDEGTASLILDTKPSKVVSDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSERLMSNVLLKKIGDYEVAWVDAEVGKTENDMLSLLPVSAAAPPHKSVLVGDLKLADFKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKASSSSEHLVVVLVLSKLLLKVLCVRITIKFVTISIHSFICFRFISRTCAWQISNFFASLPYFV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0924 823 Coils Coil 435 455 - -
Lal2g0924 823 Gene3D - 7 256 IPR036866 -
Lal2g0924 823 Pfam Beta-Casp domain 242 407 IPR022712 -
Lal2g0924 823 Pfam Cleavage and polyadenylation factor 2 C-terminal 697 755 IPR025069 -
Lal2g0924 823 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 346 760 IPR027075 GO:0005847|GO:0006378|GO:0006379
Lal2g0924 823 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 1 303 IPR027075 GO:0005847|GO:0006378|GO:0006379
Lal2g0924 823 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 587 639 IPR011108 -
Lal2g0924 823 SMART Beta_Casp_2 242 408 IPR022712 -
Lal2g0924 823 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
Lal2g0924 823 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 656 IPR036866 -
Lal2g0924 823 Pfam Metallo-beta-lactamase superfamily domain 22 188 IPR001279 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0924 K14402 - gmx:100777002 1291.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0924 2 6204074 6216964 Lal2g0924 2 6204074 6216964 ECH