Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0799 ATGTCTAGAATCTTCTCAAGATGGAAGAAGGTGAAGGAAATGGCATCACTTTCAGATACCCATTTGGCAGTTTCCTCGAATAATCGTTGTATGAACCGAACTGGCTTCAAATTCAACCAGATGCGTCCAATCTCGACCCACCTGAAGAATTCCAACCTCCACATTATCGCCGCCCATCGCCGCCGCGGACCACTCATTGGAGTTCAGGAGCGGTACAAGTGGGACCGGGGTGGCTCCGGCGATATCAGCAACCCGGCACGGAGGATTCGGGCAGAGGCTAATTGCCCACGTTGCACCAAAGACATGAACCTCATATTCTCCAATAACCATTTCCCACCTTCTGATTCAAATTCAGGTTCTGAAGCTTTTGATTCAAATTTAGCAACACCATCAATAACTGAAGAGGGTAGTGGTTACCAATCTGTGAATATTTGCCCAAGTTGCAAAAGTGCTTATCACTTTAGACCTAACAACACTGCACCTTTGCAAGGTACATTTGTGGAGATTGGAAGGGGAAGTAGTAGTAACAGTATTGTTAAGAGTGGGAGTAGTAAAATTCCTAGGAGGATCACACAAGGTAAAGGTAGTAGCAGTGGTAAAAATGGTACTAGTGGTAATTGGCTTGAACTGACAACATGGGACAATATAAGATCAGCAAAAATTAATGGTCATAATGGGGAGCCACCTGAGGATTGGCCTCCACCACCACCACCACCACCGGGTGTAAATGATGGGAATGGGAATGGGAATGGTTTGGCCGTGCATAATCCTCCAGGCGCATCTTTTGCACCCGGGGTTAATGTTATCCGGCATACCGGGCTCAGGGAAGGCCGTTTGGGCGGCGGTGGAGGTGGAGGCAATGGAGAGAAGACTACCTGGGGAGGGTCTAATTTGGGGAAGGATTTGCCATCCCCAAAGGAGATTTGCAAGGGTCTTGACAAGTTTGTTATTGGCCAAGACAGAGCCAAAAAGGTGCTTTCTGTAGCTGTATATAACCACTACAAGCGAATATACCATGCCACTTTGCAGAAAGGGTCAGGACCAGATTCAGGAATTTTAGAAGGATTTGATGATGACGATAATGTGGATCTAGAAAAGAGTAATGTTCTCTTGATGGGCCCAACAGGGTCAGGGAAGACATTACTTGCAAAAACACTAGCTCGATTTGTGAATGTTCCGTTTGTCATTGCCGATGCAACAACCTTAACACAGGCAATTATAGTTACAAATTCTGATTTGGTTCCACGGCTGGCTCATGATTTTGTTGTCCTAGGACAAAATTATGTTTTTAGTTACCTAAAAGAGAAATGCTCTAATTTGCAGGCTGGTTATGTCGGAGAAGATGTTGAATCAATACTGTACAAACTTCTTGCGGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATCAGTCGTGATGTTTCTGGCGAGGGTGTTCAACAGGCATTATTAAAAATGCTGGAAGGAACCATCGTAAACGTTCCTGAGAAAGGAGCAAGGAAGAATCCGCGAGGAGATAATATACAGATGGACACAAAGAATATTCTTTTTATATGTGGTGGAGCATTTATTGATCTTGAAAAAACGATTTCAGAGAGACGACAAGATTCTTCTATTGGTTTTGGAGCACCAGTTCGTGCAAATATGAGAGCTGGTGGAGTAATGGATTCAGCAATAACATCATCTTTACTTGAATCGGTGGAAAGTGCTGATCTTATTGCATATGGCCTCATACCAGAGTTTATTGGACGATTTCCCATTTTAGTCAGCTTGTCAGCTTTAACTGAAGACCAACTTATGCTGGTCCTCACGGAACCAAAAAATGCTCTTGGTAAGCAGTACAAGAAATTATTTGGCATGAATAATGTAAAGCTATACTTCACAGATAAAGCTCTAAGACTGATTGCAAATAAAGCTATGGCCAAAAATACTGGCGCCAGAGGTTTAAGAGCCCTACTCGAAAGCATTTTAACCGAAGCCATGTTTGAGATTCCTGATATTAAGACAGGAACTGACCGGGTTGATGCGGTTGTTGTTGATGAGGAGTCAGTAGGATCAGTAAATGCACCTGGATGTGGAGGAAAAATTCTTCGTGGAGATTGTGCTTTGAAGCAGTACATAGCTAAGGTTAAGGATTCAGTGGTCAATGTTGAGATAGCTGAAACAGACTTAACTGAGGGGGGTTCAGAGCTTTCATCAAGAGCCATGAGCATGTAG 2274 0.434 MSRIFSRWKKVKEMASLSDTHLAVSSNNRCMNRTGFKFNQMRPISTHLKNSNLHIIAAHRRRGPLIGVQERYKWDRGGSGDISNPARRIRAEANCPRCTKDMNLIFSNNHFPPSDSNSGSEAFDSNLATPSITEEGSGYQSVNICPSCKSAYHFRPNNTAPLQGTFVEIGRGSSSNSIVKSGSSKIPRRITQGKGSSSGKNGTSGNWLELTTWDNIRSAKINGHNGEPPEDWPPPPPPPPGVNDGNGNGNGLAVHNPPGASFAPGVNVIRHTGLREGRLGGGGGGGNGEKTTWGGSNLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLQKGSGPDSGILEGFDDDDNVDLEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIIVTNSDLVPRLAHDFVVLGQNYVFSYLKEKCSNLQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKNPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGVMDSAITSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMLVLTEPKNALGKQYKKLFGMNNVKLYFTDKALRLIANKAMAKNTGARGLRALLESILTEAMFEIPDIKTGTDRVDAVVVDEESVGSVNAPGCGGKILRGDCALKQYIAKVKDSVVNVEIAETDLTEGGSELSSRAMSM 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0799 757 Gene3D - 296 611 IPR027417 -
Lal2g0799 757 SMART ClpB_D2_small_2 613 706 IPR019489 -
Lal2g0799 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 697 IPR027417 -
Lal2g0799 757 MobiDBLite consensus disorder prediction 173 207 - -
Lal2g0799 757 Pfam C-terminal, D2-small domain, of ClpB protein 613 682 IPR019489 -
Lal2g0799 757 CDD AAA 366 514 - -
Lal2g0799 757 MobiDBLite consensus disorder prediction 228 243 - -
Lal2g0799 757 Pfam AAA domain (Cdc48 subfamily) 446 606 IPR003959 GO:0005524|GO:0016887
Lal2g0799 757 Gene3D - 612 712 - -
Lal2g0799 757 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 440 757 - -
Lal2g0799 757 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 55 411 - -
Lal2g0799 757 MobiDBLite consensus disorder prediction 219 299 - -
Lal2g0799 757 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 440 757 - -
Lal2g0799 757 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 55 411 - -
Lal2g0799 757 SMART AAA_5 365 564 IPR003593 -
Lal2g0799 757 MobiDBLite consensus disorder prediction 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0799 Lal-Chr2 5140747 5148682 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0799 K03544 - gmx:100805340 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0799 2 5140747 5148682 Lal2g0799 2 5140747 5148682 ECH