Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0787 ATGGCTTCCATTCCCACTCTCTCTTCCTCTCTACCCACAATTTCTTCTTCCAATTCAAACTTCAACAACCACTCACCCTTCACATTCCTTACTCTCCCTCTCACCTCTCTCTTCCCAACCAATATCTCCCTTCAACGACGCTCTTTAACCCCTTTCCTTCTCAACATTAACAATTTTCCTCGTCCCCGTGCCTTTTCACCAACGGTGTCGTTTAGCCTCCCCACTACAAAACGTCAAACAGATGGTGAACCAGAGAAAACCCTAAAGTGGTCTGCGAGGGCAATAAAGTCTTTTGCAATGGGGGAATTGGAAGCCAGGAAGCTCAAATATCCAAACACTGGAACTGAGGCACTTCTCATGGGGATCTTAGTAGAAGGAACTAGTCATGCTGCAAAATTCTTAAGAGCTAATGGAATTACACTTTTCAAAGTTCGTGATGAAACAGTAGAGCTACTTGGGAAATCTGACATGTATTTTTTTAGTCCTGAGCATCCTCCATTGACTGAACCAGCTCAGAAAGCTCTCATTTGGGCTGTTGATGAGAAATTTAAGTCAGGTGAAGAAGAGGAAATTACTGTGACTCATATACTTTTAGGAATTTGGTCACAAGAAGAATCAGCAGGTCGCAGTATCTTGGCTGCTCTGGGTTTCAATGATGAAAAAGCCCAAGAACTTGCTAAAATTAAAGGAGATATTGATTTGAGCTTTAAGAAGCAAACATAG 723 0.4219 MASIPTLSSSLPTISSSNSNFNNHSPFTFLTLPLTSLFPTNISLQRRSLTPFLLNINNFPRPRAFSPTVSFSLPTTKRQTDGEPEKTLKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSHAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPAQKALIWAVDEKFKSGEEEEITVTHILLGIWSQEESAGRSILAALGFNDEKAQELAKIKGDIDLSFKKQT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0787 240 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 7 235 - -
Lal2g0787 240 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 7 235 IPR044217 -
Lal2g0787 240 Pfam Clp amino terminal domain, pathogenicity island component 189 224 IPR004176 -
Lal2g0787 240 Pfam Clp amino terminal domain, pathogenicity island component 104 153 IPR004176 -
Lal2g0787 240 Gene3D - 89 236 IPR036628 -
Lal2g0787 240 SUPERFAMILY Double Clp-N motif 89 221 IPR036628 -
Lal2g0787 240 ProSiteProfiles Clp repeat (R) domain profile. 84 235 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0787 Lal-Chr2 5057083 5059808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0787 - - gmx:100786582 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0787 2 5057083 5059808 Lal2g0787 2 5057083 5059808 ECH