Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0786 ATGAGTTTCGCCGCATACAAAATGATGCACTCCCCAACCGGAATCGAAAACTGCGCCTCCGCTTTTCTCACCCATTCACCTTCCGATTACGTCCCCCGCATTCTCCCTCTCCCCGCCGACGATCTTGACTCCGACTGGACCCCCCAACGCCCTCACATTGGTCCTGTTCCCAACCTCGTCACCACCGCTGCCAATGTTCTCGAAGTCTATGCCGTCCGGGTCCAGGAGGAAGGTGCTAAGGGTGGTGGTGGTAATGCTGAGCCCAGGCGAGGTGGGATTGTTGATGGTGTCGCCGGGGTGACGCTTGAGCTCGTTTGTCATTACAGGTTGCATGGTAATGTTGAAACCATGGCCGTGTTGAGCATTGGAGATGGTGATGGTTCCAGGAGGAGGGATTCTATCATCTTGACTTTTAAAGATGCAAAGATTGCAGTTCTAGAGTATGATGATTCTATTCACGGACTTCGAACAAGTTCTCTGCATTGTTTTGAGGGTCCAGAGTGGCTTCATTTGAAAAGAGGAAGAGAACAATTTGCAAGAGGTCCATTGGTGAAGGTTGATCCTCAGGGAAGGTGTGGTGGAGTGCTTATATATGATCTGCAAATGGTAATACTAAAGGCTACTCAGGCTGGTTCTGGTTTAGTTGGGGAGGATGATGCCTTAGGTTCTGGAGGCGCAATTGCTGCTCGTATTGAGTCATCTTATATGATAAGTCTACGTGACTTAGATATGAGGCATGTAAAAGATTTCACATTCGTTCATGGCTATATTGAACCTGTGATGGTGATCCTGCATGAGCGTGAGCTTACCTGGTCTGGACGTGTCTCATGGAAGCACCATACTTGCACAATATCAGCACTTAGTATAAGCACAACATTGAAGCAGCATCCACTCATTTGGTCAGCTGTTAATCTCCCACATGATTCCTACAAGCTTCTTGCAGTGCCCTCACCAATAGGTGGTGTTCTTGTAGTTGGTGCTAACACCATTCATTATCACACTCAGTCTGCTTCATGTGCATTGGCCTTGAACAGCTATGCTGTTTCACTTGATAGTAGTCAAGAGATGCCAAGATCAAGTTTCAATGTTGAACTTGATGCCGCCAATGCAACTTGGTTGTTGAGTGATGTGGCTTTGCTGTCAACAAAAACTGGCGAACTGCTAGTGCTTACTCTTGTTTATGATGGAAGGGTTGTACAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTCTTTCATCTGGTATTACGACAGTTGGGAATTCTATGTTTTTTCTTGCCAGTCGATTAGGAGACAGCATGCTTGTGCAATATTCTTGTGGATCTGGCATTTCAATGTTGTCAGCCAATCTAAAAGAAGAGGTTGGTGATATTGAAGTGGATGCTCCATTAGCGAAGAGATTGCGGAGGTCACCTTCTGATGCTCTGCAAGATGTGGTTAGTGGTGAGGAGCTTTCCTTATATGGATCTGCTTCAAATAGAACAGAATCAGCACAGAAAACCTTCTCATTTGCAGTGAGGGATTCATTGATTAATGTTGGTCCTTTGAAAGATTTCTCTTACGGTTTAAGGATAAATGCTGATGCAAATGCTACAGGGATATCCAAACAGAGTAACTATGAATTAGTGTGCTGTTCTGGTCATGGAAAGAATGGTTCTCTTTGTGTTCTTCGGCAGTCAATTCGCCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAACACACGCTCTCATAGTGCTGATTCATCTAAGCTGGCCGATGATGACGATGAGTATCATGCATACCTTATTATAAGTTTGGAGGCTCGTACTATGGTTCTAGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAAACCCTCGCTGCTGGGAATTTATTTGGCAGGCGTCGAGTTATCCAAGTCTTTGAACGTGGTGCTCGAATTCTTGATGGTTCTTTTATGACCCAGGAAGTAAGCTTCGGATCTTCTAATTCTGAATCTAGTTCTGGATCTGAGAGTGCTATAACACTATCTGTTTCTATAGCTGATCCTTATGTCTTACTCAGAATGAGTGATGGAAGTATTCGACTTTTGATTGGAGATCCTGGTAGTTGCACCATTTCCCTTATTTCTCCAGCTTCACTAGAGAGCTCAAAGGGATCAGTATCTTCATGTACACTGTACCATGATAAAGGGCCTGAGCCATGGCTAAGGAAAACAAGTACTGATGCATGGCTTTCTACTGGGGTTAGTGAGGCTATTGATGGCACTGATGGTGCAGCTCAGGACCATGGGGATATATACTGTGTTGTTTGTCATGAAAATGGTACCCTTGAAATATTTGATGTCCCCAATTTCAGTTGTGTATTTTCAGTGGAAAGTTTTATTTCTGGAAAGAGCCACCTTGTTGATGCTCTGGTGAAAGAGGTGCCAAAGGGGGATAAAGATTCTGATGGAATGGTCAGCCAAGGCAGGAAGGAGAATGTACTGAATATGAAGGTTGTTGAGTTGGCCATGCAGAGATGGTCAGGGCAGCATAGCCGTCCATTTCTTTTTGGAGTACTGAGTGATGGAACAACTCTTTGTTACCATGCTTACCTTTATGAAAGTCCAGATGGGACTTCTAAAGTTGAGGATTCAGTATCTGCAGTGCCCGTTGGCCTTTCCAGTACTAGTGTATCCAGGCTTAGAAATTTGAGATTTGTTCGTGTACCCTTGGATGCATATGCCAGGGAGGAGGCATCAAATGAATCCCTTGGTCAACACATTACCATTTTTAAGAATATTGGTGGTTATCAAGGATTCTTCCTTTCGGGTTCAAGACCGGCTTGGGCTATGGTATTTAGAGAACGACTTCGTATTCATCCACAGTGCTTTATCTTTTCTGGTAGTCCCCTGTCAGACCAGCCAGGTAGTGTAATAGGCTCTGGAATAGGCATTACTGCCAACTGCGAATGCCATTTTTGTAGAGATTGTAATATGATGTTGATTGGACTGCTTATTGCGAGCCAGATCAGTGGACGAGTGCATCTTTCTGGTTTGGGTTTATATCTATGTGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCACGGGCTCATATATGTCACATCGCAGGGTGTATTAAAGATATGCCAGTTGCCTTCTAGCTCAAACTACGATAGCTACTGGCCTGTACAGAAAGTTCCACTAAAAGCCACTCCGCACCAAGTAACTTACTATGCAGAGAAGAATTTGTATCCGCTTATTGTTTCAGTTCCTGTTCTTAAGCCATTAAATCAAGTTGTTGCTCTGGTCGACCAAGACGTCAATGTTCAGGCTGAGAGTCAGAATTTGAATTCTGATGAGCAAAACCGCTTTTATACTGTTGATGAATTTGAGGTTCGAATTATGGAGCCAGAAAAGTCTGGTGGCCCTTGGCAAACAAAGGCAACTATACCTATGCAAAGTTCTGAAAATGCCCTCACTGTTAGAATGGTTACTCTGCTGAATACAACCTCAAAAGAAAATGAAACGCTTTTAGCTATTGGTACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGTATCCTCCTGTTTTCTTTGGGAAAAAATACTGATAATTCTCAAACTCTGGTTTCAGAGGTGTACTCAAAAGAATTAAAAGGTGCTATATCTGCCTTGGCTTCACTTCAGGGCCATCTATTAATAGCATCTGGTCCAAAAATTATTCTGCATAAGTGGACTGGCACGGAGTTGAACGGTATTGCATTTTTTGATGCGCCACCGTTACATGTTGTGAGCTTAAATATTGTGAAAAATTTCATCCTTATTGGTGACGTCCATAAAAGCATATACTTTCTTAGTTGGAAAGAGCAGGGTGCTCAACTTAGCTTATTAGCCAAGGATTTTGGTTCTCTCGATTGCTTTGCAACTGAATTTTTGATTGATGGAAGTACTCTAAGTCTCATGGTTTCAGATGATCAAAAAAATATTCAGATCTTTTACTATGCACCAAAGATGTCTGAGAGTTGGAAAGGACAGAAACTTCTTTCAAGAGCCGAGTTTCACGTTGGTGCTCATGTGACTAAGTTCTTAAGGTTGCAGATGCTTTCCACTTCCGATCGATCTGGTTCTGGTCCCGGCTCAGATAAAACCAATCGTTTTGCCTTGTTATTTGGTACATTGGATGGCAGTATTGGTTGCATTGCACCTCTTGATGAAATTACATTTCGCAGGCTGCAATCTTTACAGAGAAAACTTGTTGATGTTGTACCCCATGTTGCTGGCCTAAATCCAAGAGCTTTCAGACAATTTCGTTCAAATGGAAAGGCCCATCGGCCTGGCCCTGACAGTATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAAGAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCACAAATACTCACGAATCTAAGTGACCTATCTCTTGGAACAAGCTTCTTGTGA 4533 0.4315 MSFAAYKMMHSPTGIENCASAFLTHSPSDYVPRILPLPADDLDSDWTPQRPHIGPVPNLVTTAANVLEVYAVRVQEEGAKGGGGNAEPRRGGIVDGVAGVTLELVCHYRLHGNVETMAVLSIGDGDGSRRRDSIILTFKDAKIAVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLIYDLQMVILKATQAGSGLVGEDDALGSGGAIAARIESSYMISLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWSGRVSWKHHTCTISALSISTTLKQHPLIWSAVNLPHDSYKLLAVPSPIGGVLVVGANTIHYHTQSASCALALNSYAVSLDSSQEMPRSSFNVELDAANATWLLSDVALLSTKTGELLVLTLVYDGRVVQRLDLSKSKASVLSSGITTVGNSMFFLASRLGDSMLVQYSCGSGISMLSANLKEEVGDIEVDAPLAKRLRRSPSDALQDVVSGEELSLYGSASNRTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGISKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKNTRSHSADSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVFERGARILDGSFMTQEVSFGSSNSESSSGSESAITLSVSIADPYVLLRMSDGSIRLLIGDPGSCTISLISPASLESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVSEAIDGTDGAAQDHGDIYCVVCHENGTLEIFDVPNFSCVFSVESFISGKSHLVDALVKEVPKGDKDSDGMVSQGRKENVLNMKVVELAMQRWSGQHSRPFLFGVLSDGTTLCYHAYLYESPDGTSKVEDSVSAVPVGLSSTSVSRLRNLRFVRVPLDAYAREEASNESLGQHITIFKNIGGYQGFFLSGSRPAWAMVFRERLRIHPQCFIFSGSPLSDQPGSVIGSGIGITANCECHFCRDCNMMLIGLLIASQISGRVHLSGLGLYLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSSSNYDSYWPVQKVPLKATPHQVTYYAEKNLYPLIVSVPVLKPLNQVVALVDQDVNVQAESQNLNSDEQNRFYTVDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQGEDVAARGRILLFSLGKNTDNSQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFFDAPPLHVVSLNIVKNFILIGDVHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRSGSGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDVVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILTNLSDLSLGTSFL 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0786 1510 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1501 - -
Lal2g0786 1510 Gene3D - 55 448 IPR015943 GO:0005515
Lal2g0786 1510 Gene3D - 1032 1417 IPR015943 GO:0005515
Lal2g0786 1510 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 132 692 IPR018846 -
Lal2g0786 1510 Pfam CPSF A subunit region 1143 1475 IPR004871 GO:0003676|GO:0005634
Lal2g0786 1510 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1501 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0786 K14401 - gmx:100785543 2497.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0786 2 5038939 5056206 Lal2g0786 2 5038939 5056206 ECH