Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0779 ATGATGAAACAGGTTCTTCTTCTATTGTTCTTGGCCTATGGATTGACCCTTTCACTCTCAGAGTCCAAATCTGGTCCTCCAATGCCTCAAGCTGCAGATAAATCCTTCACTCTTGGCTATATTCAGATGAAGAATGCAGCGAATTGTTCTTACAACGTTGTTATATCTACAAGTTGTTCATCACCTAAGTTTACAAATGATCAGATTGGTATTGTTTTTGGAGATGCTTATGGCAACCAGGTATATGCTCCAAAACTTGGTGATCCAGTTTCAAAGACATTTGAGCAATGTTCTTCAGATACATTTCAGATAGATGGTGCATGTGCCTCAAAGATTTGTTATGTGTACCTTTACAGATCTGGTGAAAATGAAAATAATACTTGGAAGCCTGAAAACCTTAAAATATATGGCATTGATACAAAACCTATTAATTTTGTGTTCAATACCTCTATCCCTAATGAAACTTGGTTTGGTTATAATTTGTGTAAGTTTCCAATAACTCCTCCTCCACCACACTTTGACCCTTTTCCTCCAACAACTTCTCCTCCTCCTCCTCCTCCTCCCTTTCATCCATTCCCTCCCTCAACTCCTCCACCACCTCCTCCCTTTCATCCATTCCCTCCCTCAACTCCTCCACCTCCACCTCCTCCTCCTACCACCACCCCTCCCCCTCATTCTTCTTCATACAAACTAGTCACTCCAAAGTGGATTACATATGTGGTGGTTCTAGGATTTGTTCTTAGATTATTGGGAAAAAAGATGATCAAACAAGTTCTTCTTCTGCTCTCTTTGGCCTTTGTATTGACCCTTTCAATCTCAGAGTCCAAATATATTTCTCTGCTACCTCAACCTGCGCAATCCTTCAGTGTTGGTTATATCCAGATGAAGAATGCTGCCAACTGTTCTTACATGGTGGTTATATCTACAAGTTGTTCATCACCTAAGTTTACTAATGACCAGATCAGTATAGTTTTTGGGGATGCTTATGGCAACCAGATATATGCACCAAGACTGAATGATCAAGTTTCAAGGACATTTGAACAGTGTTCTTCAGATACATTTCAGATAGATGGTCCATGTGCCTCTCAAATTTGTTATGCATACCTATATAGATCTGGTGCAAATGAAAATGGTGGTTGGAAGCCTGAAAGTGTGAAATTCTATGGCATTGATACAGAGCCTGTTACCTTTAATTTCAACACTTCCATTCCCAGTGATACATGGTATGGATATAACTTGTGTGACACTCCAACTCCTCCTCCTCCATCTTCTTCAGACCAATTATTCACTCCAAAATGGCTTATATATGTTGTTCTAGCATATCTTCTTAGTTTCTGGCTGTAA 1344 0.3973 MMKQVLLLLFLAYGLTLSLSESKSGPPMPQAADKSFTLGYIQMKNAANCSYNVVISTSCSSPKFTNDQIGIVFGDAYGNQVYAPKLGDPVSKTFEQCSSDTFQIDGACASKICYVYLYRSGENENNTWKPENLKIYGIDTKPINFVFNTSIPNETWFGYNLCKFPITPPPPHFDPFPPTTSPPPPPPPFHPFPPSTPPPPPPFHPFPPSTPPPPPPPPTTTPPPHSSSYKLVTPKWITYVVVLGFVLRLLGKKMIKQVLLLLSLAFVLTLSISESKYISLLPQPAQSFSVGYIQMKNAANCSYMVVISTSCSSPKFTNDQISIVFGDAYGNQIYAPRLNDQVSRTFEQCSSDTFQIDGPCASQICYAYLYRSGANENGGWKPESVKFYGIDTEPVTFNFNTSIPSDTWYGYNLCDTPTPPPPSSSDQLFTPKWLIYVVLAYLLSFWL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0779 447 PRINTS Proline rich extensin signature 175 187 - -
Lal2g0779 447 PRINTS Proline rich extensin signature 190 211 - -
Lal2g0779 447 PRINTS Proline rich extensin signature 211 227 - -
Lal2g0779 447 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 300 411 IPR036392 GO:0005515
Lal2g0779 447 CDD PLAT 49 162 - -
Lal2g0779 447 MobiDBLite consensus disorder prediction 173 224 - -
Lal2g0779 447 Pfam Embryo-specific protein 3, (ATS3) 294 414 IPR010417 -
Lal2g0779 447 Pfam Embryo-specific protein 3, (ATS3) 42 162 IPR010417 -
Lal2g0779 447 Gene3D PLAT/LH2 domain 49 158 - -
Lal2g0779 447 PANTHER - 255 447 - -
Lal2g0779 447 PANTHER - 2 164 - -
Lal2g0779 447 PANTHER EMBRYO-SPECIFIC PROTEIN 255 447 - -
Lal2g0779 447 PANTHER EMBRYO-SPECIFIC PROTEIN 2 164 - -
Lal2g0779 447 MobiDBLite consensus disorder prediction 173 226 - -
Lal2g0779 447 Gene3D PLAT/LH2 domain 298 410 - -
Lal2g0779 447 CDD PLAT 301 414 - -
Lal2g0779 447 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 159 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0779 Lal-Chr2 4988538 4992464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0779 - - lang:109353502 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0779 2 4988538 4992464 Lal2g0779 2 4988538 4992464 ECH