Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0722 ATGTTTCATTACTTAGTTTCAAATACTGGAAACACCCCATACTCCACTAAAAGGAAGACTCATCCGTTGCAGGGAGACTTCCCAGAAGTGATAGAGGAGTATTTGCAACATGGTAGTATGAAATGCATTGCCTTCAATCGGAGGGGTACTCTTCTTGCTGAGCGCAGTTTTTTGGGTCGCCATGACACTTTACCAGTTGCGTCGTGGGTGGAGTGGCTCACTTTAGTAGCTACTTTAGTGAGGGGAGCGGCGAATGATGCGTGTGACAGGGATGCACGGGGTCGCCATGACACTTTACCACTTGCGTCGTGGGTGGAGCGACTCACTTTAGTAGCCACTTTAGTGAGGGGAGCAGCGAATAGCGCGTGTGACAGGGATGCACGGGCTGGGTGCATTGATGGAAGCTGCGTTATCTGGGATTTTGAAACCAGGGGCATTGCTAAAGAGCTTCGAGATAATAGATATTCTTCTCCCATAACTAGTATCTGTTGGTCAAAGTGCGGTAATCGAATTCTTTCATCTGCTGCTGACAAATCAATATCTTTGTGGGATCGAGTAGTTTTGCAACAAACCCCTCTACTAGTTCATCTTCATCCAAGTTCATCGCCACCTCTCTGCTTGGCATGCCCTCTCTCAAGTGCTCCATTGATTGCTGACTTGCATACGGGAAACATAACTTCGCTTAAAATTTCTGTCTCAGAGATATCCAATGGACCAACCCCTGCATCGCGCAACAAGTGCTCTGATGGAACTACCTCCTTCACACCCACTGCTGCATGTTTAGTAATACGTGCCGTGGTTCCTATCCCTGGCGGGTCTGTAGTGAAGAACATTGTGTTCAGCAGGAATGGACAGTATCTACTAACAAACTCAAATGATCGGGTAATCAGGGTCTATGAAAATCTTCTGCCCTTGAAAGATGAAGTTAGAGCCCTTGATGACTTGAATGAGAGGTTCAGTGATCTAAGTGGTCTTGAGAAGCTGAAGGGTGTAGGATCAAAATGCTTAACATTATTTCGAGAGTTTCAAGACGCGATCACAAAGGTGCACTGGAAAGCACCCTGCTTCAGTGGTGATGGCGAATGGGTTGTCAGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGACCGGGCTGGGCATCTTGTGAAAATTCTCGAAGGACCTAAGGAAGCCCTTATTGATTTAGCGTGGCATCCTGTACGTCCCATTGTGGTATCTGTTTCCTTTAATGGCATAGTTTATATCTGGGCGAAAGATTACATCGAGAATTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTTGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGAATCCTGACACCGAGAAGATAAAAGGATCTGATGCTAACGAAGATGAGGAGGTTGACATTGTAACAGTGGAGAAAGATCCAGCTTTTAGTGACTCTGATATGTCTCAAGAAGAACTGTGTTTCCTGCCACCAACTTTTGATATCGCTGAACAACAAGAAGCCAAGTTTGTAGAAAGTTCTTCAAAGATGGTGGACAGTAATAACTCCGGATCCCCACGTTCAGAAGAGGCTGGACCGAATGGGCATACATCGAATAATGCCTCAAGTCCAGTTGAAGATGATGTTGGGGGAACACACATTAAAAGAAAGCGGAAACTTTCAGAGAAGGTGTTGGAGTTGCAGGTTGAAAAAGTGAAGAAACAATCAAAATCTAGCAAAACATAA 1740 0.4506 MFHYLVSNTGNTPYSTKRKTHPLQGDFPEVIEEYLQHGSMKCIAFNRRGTLLAERSFLGRHDTLPVASWVEWLTLVATLVRGAANDACDRDARGRHDTLPLASWVERLTLVATLVRGAANSACDRDARAGCIDGSCVIWDFETRGIAKELRDNRYSSPITSICWSKCGNRILSSAADKSISLWDRVVLQQTPLLVHLHPSSSPPLCLACPLSSAPLIADLHTGNITSLKISVSEISNGPTPASRNKCSDGTTSFTPTAACLVIRAVVPIPGGSVVKNIVFSRNGQYLLTNSNDRVIRVYENLLPLKDEVRALDDLNERFSDLSGLEKLKGVGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVSGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSFNGIVYIWAKDYIENWSAFAPDFKELEENEEYVEREDEFDLNPDTEKIKGSDANEDEEVDIVTVEKDPAFSDSDMSQEELCFLPPTFDIAEQQEAKFVESSSKMVDSNNSGSPRSEEAGPNGHTSNNASSPVEDDVGGTHIKRKRKLSEKVLELQVEKVKKQSKSSKT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0722 579 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 129 260 IPR037850 GO:0048188
Lal2g0722 579 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 20 53 IPR037850 GO:0048188
Lal2g0722 579 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 263 578 IPR037850 GO:0048188
Lal2g0722 579 ProSiteProfiles Trp-Asp (WD) repeats profile. 152 184 IPR001680 GO:0005515
Lal2g0722 579 SUPERFAMILY WD40 repeat-like 130 419 IPR036322 GO:0005515
Lal2g0722 579 SMART WD40_4 262 300 IPR001680 GO:0005515
Lal2g0722 579 SMART WD40_4 381 420 IPR001680 GO:0005515
Lal2g0722 579 SMART WD40_4 143 184 IPR001680 GO:0005515
Lal2g0722 579 SMART WD40_4 332 379 IPR001680 GO:0005515
Lal2g0722 579 Pfam WD domain, G-beta repeat 335 379 IPR001680 GO:0005515
Lal2g0722 579 Pfam WD domain, G-beta repeat 157 184 IPR001680 GO:0005515
Lal2g0722 579 Gene3D - 266 429 IPR015943 GO:0005515
Lal2g0722 579 MobiDBLite consensus disorder prediction 508 558 - -
Lal2g0722 579 MobiDBLite consensus disorder prediction 1 19 - -
Lal2g0722 579 Gene3D - 109 254 IPR015943 GO:0005515
Lal2g0722 579 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 152 184 - -
Lal2g0722 579 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g0722 579 MobiDBLite consensus disorder prediction 451 467 - -
Lal2g0722 579 MobiDBLite consensus disorder prediction 508 544 - -
Lal2g0722 579 MobiDBLite consensus disorder prediction 445 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0722 Lal-Chr2 4495951 4500211 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0722 K14961 - gmx:100786748 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0676 1 4410381 4414130 Lal2g0722 2 4495951 4500211 LSH