Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0655 ATGTCTCAGGATGATGCTGGTGTTGTGGGTTCAAGTTCTGTTGCTGAGAATGATAGATCAAAGGCCCAAAGAATTGTTGATAGTAATAATGAAGATAAAATCAGTTACCTACCTGAAGGAGTTCTTGGAAAGATTCTTTCTCTTCTTGTAACGAAAGATGCAATTCGTACAAGTGTATTATCTAAAAGATGGATCTACAATTGGACTTTAATTGACAAGATTGATTTGGATGATACTTTGCTCTATTCTAAGATAGCAGTGTATTCACAAAATAGGTCTAATACTGTTAACACACACTTTGTGAACCTTGTAAACAGAATACTCCGCCATGTCAATTCTAGTATCCAAAGTTGCCATCTCAAATTATCACTTGATAATTCATACCATCTTAATTCATGGATCATTGCTATCTTAGAAAAGAGAGTCCAAAATCTTCGTATTCGGGCTGCTGCAATTTATTTTGTCCTCTACCCTTGTTCCCTTTTTGACTGCAACACCCTTGTAGAATTGATACTTGACATTGATTGCACCGTTAAAGTTCCGATGTTTAATTGTCTTCCAAAACTCCAACTCCTTAGGCTTTATGGAATTACATTTGACTGTAGTTCCTCCTCTACTAAGTTAAAAGAGTTTGTTCTTAGCCTTCCTGTACTTAAGGTTTTCGCTTCGAGACAATGTTTATGGTATAATGTCACCATAGATGCGCCTCTGCTTGAAAGTTTTTACCTAGAATTCTTTAACAATGGGCCATCATATGCAACTCCCACTTGTCCACTTGGTGTTGTCAGAGTTTGTACCTCAGGTGTTGCAAAATTCTTTTACCGAGGTCATCTTTTGGAAGGAATCGTTGTATTTGACCCACCTTTGGTTCATAATGCTTCTACCGATTTACTTATAGAAACATGTCAGAAGGAGGATGTGCAAGATACAGCTACCCATGTTTGTGTGCTTCTCTCACAAATCAAAGAAGTGGAATGCTTGAAACTAGCATTTCGCAAGCATCTTGTCTTTTCAAACGATTTCCTGGCAAACTCACCTGTATTTGGAAGGTTAACTTCTTTGCAACTAGACAAGCTTACTGCTGAAGCCTTGTTGGACTTGCTCAACAAGTCACCTAATCTTAAGACTCTAGTGTTAAATCATGCAACAACTGGACTTGATAAGGATTTCTTTGCATCTTCAATGGTGCCTCATTGTTTGCTATATAGTCTCAAGGTGGTTCGAATTAGAGAATTTGAACATGGTCATATTCATCTGGCTAAGTTTGTAATAGAAAATGCTGCGGTCTTGGAGCATATGGATATCTCCACTGTGATGCTGTGGCGCAATACAGTGCCTGGAATGCAAAAGATTAAGGAGGAGGTTTATTCATTTTCACAGTGCTCCAGTAATGCTTTAATAGAATTTTCAATAAATAGCAGTGATTACTGA 1431 0.3767 MSQDDAGVVGSSSVAENDRSKAQRIVDSNNEDKISYLPEGVLGKILSLLVTKDAIRTSVLSKRWIYNWTLIDKIDLDDTLLYSKIAVYSQNRSNTVNTHFVNLVNRILRHVNSSIQSCHLKLSLDNSYHLNSWIIAILEKRVQNLRIRAAAIYFVLYPCSLFDCNTLVELILDIDCTVKVPMFNCLPKLQLLRLYGITFDCSSSSTKLKEFVLSLPVLKVFASRQCLWYNVTIDAPLLESFYLEFFNNGPSYATPTCPLGVVRVCTSGVAKFFYRGHLLEGIVVFDPPLVHNASTDLLIETCQKEDVQDTATHVCVLLSQIKEVECLKLAFRKHLVFSNDFLANSPVFGRLTSLQLDKLTAEALLDLLNKSPNLKTLVLNHATTGLDKDFFASSMVPHCLLYSLKVVRIREFEHGHIHLAKFVIENAAVLEHMDISTVMLWRNTVPGMQKIKEEVYSFSQCSSNALIEFSINSSDY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0655 476 MobiDBLite consensus disorder prediction 1 19 - -
Lal2g0655 476 PANTHER CYCLIN-LIKE F-BOX 27 467 - -
Lal2g0655 476 SUPERFAMILY F-box domain 31 74 IPR036047 GO:0005515
Lal2g0655 476 Pfam FBD 394 433 IPR006566 -
Lal2g0655 476 ProSiteProfiles F-box domain profile. 31 85 IPR001810 GO:0005515
Lal2g0655 476 SMART 9598neu4hmm 398 470 IPR006566 -
Lal2g0655 476 MobiDBLite consensus disorder prediction 1 22 - -
Lal2g0655 476 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 27 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0655 Lal-Chr2 3928836 3931771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0655 23 194 EF-hand Containing Proteins AT5G41840 27.957 3.13e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0655 - - lang:109351966 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0655 2 3928836 3931771 Lal2g0655 2 3928836 3931771 ECH