Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0634 ATGGCACCTTCTTCTTCGATGACAGTGGAATACGCCAAGTCGAATCGATCATGTTGCAAGGGTTGTTCCAAAACCATCGACTCCAAAACCCTGAGATTAGGCATTGTTACTAAGGACCCTCGAGGCTATGAATCCGTTAAGTGGCACCACCCTTCTTGTTTCCCTCTCTCTTTTCATCTTCCATCTTCTCCTCAACTCTCTATTAAAGGCTTTTCCTCCTTGCAGAGCATTGACCAGGAAGCTGTGATAAAGTTATTGGCTGGACAAGATAACTTAGAAGAGAAGGATGATAAGGCAACAAAAGACATAGAAAATGAGCTACAGCAAACTGAAGCAAGTGATCCTAAGAAAAGAAAGGCAAGCATATGCAATTATGCACTGCCAATAAGGTATCATAGAAGATCTCTTAGGATTGAGTTATGTACATCTGAAGCCATAGTGGATATCAACTTTTCATTTTCCGATGCCAAGAGCAAATACAAGGATGCTACCCTTTTACCAAACTGGAAGGCATTCCAAACCATCATATTTCTTGAACGGGCTGATGGGCTGAATGATTCAAGTAAAATTGCTGCATTTGATTTTGATGGATGTCTTGCAAAAACTGATGTGAAAAGAGTGGGTGCAGATGCTTGGTCCCTCATGTATCCTTCAATTCCTGATAAACTACAAAGCTTATACAATGATGGCTTCAAATTGGTAATTTTCACCAATGAATCCAATATTGAACGTTGGAAGAATAAGAGACAGGCAGCTGTGGACTCAAAAGTCGGGCGTCTAAATAATTTTATGGAGCTAGTGAAGGTTCCAATTCAGGTTTTTATCGCTTGTGGGGTAGGTAATTCAGGTAAAGGCAAAGCTGCCATAAAGGAAGATGATCCTTTCCGCAAACCCAAACCAGGGATGTGGCAACTTATGGAGAAACACTTCAACTCCAGCATTTCCATTGATATGGATCAATCCTTTTATGTCGGTGACGCAGCTGGGAGAGAAAAAGATCACAGTGATGCTGATATTAAATTTGCAGAGGCAATCGGTTTAAAATTTTATGTCCCTGAAAAGTACTTTGACGCATGA 1077 0.4076 MAPSSSMTVEYAKSNRSCCKGCSKTIDSKTLRLGIVTKDPRGYESVKWHHPSCFPLSFHLPSSPQLSIKGFSSLQSIDQEAVIKLLAGQDNLEEKDDKATKDIENELQQTEASDPKKRKASICNYALPIRYHRRSLRIELCTSEAIVDINFSFSDAKSKYKDATLLPNWKAFQTIIFLERADGLNDSSKIAAFDFDGCLAKTDVKRVGADAWSLMYPSIPDKLQSLYNDGFKLVIFTNESNIERWKNKRQAAVDSKVGRLNNFMELVKVPIQVFIACGVGNSGKGKAAIKEDDPFRKPKPGMWQLMEKHFNSSISIDMDQSFYVGDAAGREKDHSDADIKFAEAIGLKFYVPEKYFDA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0634 358 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 10 85 IPR001510 GO:0003677|GO:0008270
Lal2g0634 358 Pfam Polynucleotide kinase 3 phosphatase 189 356 IPR013954 -
Lal2g0634 358 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 98 - -
Lal2g0634 358 Coils Coil 89 109 - -
Lal2g0634 358 Gene3D - 2 101 IPR036957 GO:0003677|GO:0008270
Lal2g0634 358 TIGRFAM DNA-3'-Pase: DNA 3'-phosphatase 177 356 IPR006551 -
Lal2g0634 358 TIGRFAM HAD-SF-IIIA: HAD hydrolase, family IIIA 189 349 IPR006549 -
Lal2g0634 358 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 5 356 - -
Lal2g0634 358 SMART zf_PARP_3 10 87 IPR001510 GO:0003677|GO:0008270
Lal2g0634 358 SUPERFAMILY HAD-like 172 355 IPR036412 -
Lal2g0634 358 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 7 90 IPR001510 GO:0003677|GO:0008270
Lal2g0634 358 CDD HAD_PNP 189 356 - -
Lal2g0634 358 Gene3D - 167 358 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0634 Lal-Chr2 3779182 3791220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0634 K08073 - gmx:100796730 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0634 2 3779182 3791220 Lal2g0634 2 3779182 3791220 ECH