LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g0599	ATGGAGGATCCTATCGCCGGAGGCAGCGACTTCAACTACCTTTCCGGCTTCGGCAACCATTTTTCCTCCGAAGCTCTCCCCGGAGCTCTCTCACCGGCACAGAACAGCCCCCTCATATGCCCCTACGGCCTCTACGCCGAACAAATCTCCGGCACCTCCTTCACCACCCCTCGCAACTTCAACCTCTGCAGTTGGTTCTATCGGGTGAAACCTTCAGTTACTCACGAACCGTTCAAGGCTCGGGTCCCTTCTAATGAAAGAATTTTGAGTGAGTTCAACCGATCCAACACTTGTACTAACCCAACTCAGCTTAGATGGAAGCCAATTGAAATACCCAATTTACCCACTGATTTTATTGATGGATTATCCACGGTTTGTGGTTCTGGTAGCTCCTTCTTGCGCCACGGTTATGCTATTCACATGTACACTGCCAACAAATCAATGGACAATTGTGCCTTTTGCAATGCTGATGGTGACTTCTTGATAGTTCCCCAACAAGGAAGACTCTTGATCACTACTGAATGTGGAAGGTTGAAAGTTTCCCCTGGTGAAATTGCTATATTACCTCAAGGTTTTCGGTTTACTGTCAATCTTCCCGATGGTCCATCCCGTGGCTATGTTGCTGAAATTTTTGGCACTCATTTTCAACTTCCTGACCTGGGACCAATAGGTGCTAATGGTCTTGCTGCCCCAAGGGATTTCCTTGTTCCTACTGCATGGTTTGAAGACAAATCCTATCCTGGGTACACTATAGTGCAGAAGTTTGGTGGTGAGCTATTTACAGCAGCACAAGATTTCTCTCCCTTCAACGTTGTTGCTTGGCATGGTAATTATGTTCCATATAAGTATGACCTAAGTAAATTCTGCCCTTACAATACTGTTCTGTTCGATCATAGTGATCCATCAATAAATACTGTTTTGACAGCACCAACGGAAAAACCCGGGGTGGCATTGCTTGATTTTGTCATTTTTCCCCCCAGATGGCTGGTTGCTGAGCATACATTCCGTCCTCCATATTATCATCGCAATTGCATGAGTGAATTTATGGGCCTCATTTATGGTGGCTATGAGGCAAAGGTTGATGGGTTTCTTCCTGGTGGTGCAAGCCTTCATAACTGCATGACTCCCCATGGTCCTGATACCAAGTCATATGAGGCTACCATTGCACGTGGGAATGATGTAGGACCTCACAAGATAACTGACACAATGGCTTTTATGTTTGAATCGTGTTTGATACCTCGTATCAGTAGATGGGCTCTTGAATCACCATTCTTGGATCATGATTATTACCAATGTTGGATTGGCCTCCGATCTCATTTTTCAGTAACTGAGACTTCGAAAACCTCAACCTTGCATGATGGACACAAGAAGTGA	1374	0.4541	MEDPIAGGSDFNYLSGFGNHFSSEALPGALSPAQNSPLICPYGLYAEQISGTSFTTPRNFNLCSWFYRVKPSVTHEPFKARVPSNERILSEFNRSNTCTNPTQLRWKPIEIPNLPTDFIDGLSTVCGSGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLIVPQQGRLLITTECGRLKVSPGEIAILPQGFRFTVNLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIVQKFGGELFTAAQDFSPFNVVAWHGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTEKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGGYEAKVDGFLPGGASLHNCMTPHGPDTKSYEATIARGNDVGPHKITDTMAFMFESCLIPRISRWALESPFLDHDYYQCWIGLRSHFSVTETSKTSTLHDGHKK	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g0599	457	Gene3D	Jelly Rolls	274	411	IPR014710	-
	Lal2g0599	457	CDD	cupin_HGO_N	104	212	-	-
	Lal2g0599	457	Pfam	Homogentisate 1,2-dioxygenase N-terminal	12	285	IPR046452	-
	Lal2g0599	457	PANTHER	HOMOGENTISATE 1,2-DIOXYGENASE	10	442	IPR005708	GO:0004411\|GO:0006559\|GO:0006570
	Lal2g0599	457	TIGRFAM	hmgA: homogentisate 1,2-dioxygenase	11	440	IPR005708	GO:0004411\|GO:0006559\|GO:0006570
	Lal2g0599	457	SUPERFAMILY	RmlC-like cupins	10	441	IPR011051	-
	Lal2g0599	457	PANTHER	HOMOGENTISATE 1,2-DIOXYGENASE	10	442	-	-
	Lal2g0599	457	Pfam	Homogentisate 1,2-dioxygenase C-terminal	286	440	IPR046451	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g0599	K00451		-	gmx:100801346	855.514

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal2g0599	2	3592067	3597450	Lal2g0599	2	3592067	3597450	ECH