Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0573 ATGGCTCTCTTAGCTACTTCTTTGATTCCTGCTTCTTTCTCCATCCCTAAAGAAGTAAAGTCCAGCACTTTTGGTGTTTCATTATCACACACTACCAAATCTGACTTCAATTCTTATGCAGTGAGGTCTAAGCAGAGGGAACTCCAGCAAAAAATTGGTGCTGTGAGGGCCCAGACAGTCGCTACGACGACTCCAGCCTTCACGAAGGTGGCACCAGAGGGCAAGAAAACTTTGAGGAAGGGCAGTGTTGTGGTTACTGGTGCTTCCTCTGGATTGGGCCTGGCTGCTGCCAAGGCTCTGGCCGAGACAGGAAAATGGCATGTAATAATGGCCTGCAGAGATTTCCTCAAAACTGCAAGAGCTGCAAAATCTGCTGGCATTGCCAAGGAAAACTACACCATTATGCATTTAGATCTTGCCTCTCTCGATAGTGTCCATCAATTTGTCAACAATTTCAGGCAATCAGGAAGGCCACTAGATGTGTTGGTTTGCAATGCCGCAGTTTACTTGCCGACTGCTAGGGAACCTACATTCACTGCTGATGGCTTTGAGCTCAGCGTTGGGACAAACCATCTCGGACATTTTCTTCTTTCACGCCTATTGCTCGAGGACCTGAACAAATCCGATTACCCATCAAGGCGCATGATCATTGTTGGCTCAATCACAGGAAACACCAACACATTGGCTGGAAATGTGCTTCCTAAGGCTAACCTTGGTGACTTGAGGGGATTTGCTGGAGGTTTGAATGGGCTAAACACTTCATCCATGATAGATGGTGGAAACTTTGATGGTGCCAAGGCATACAAGGATAGCAAGGTCTGCAACATGCTCACCATGCAAGAGTTCCACAGAAGATACCATGAGGAAACTGGGATCACATTTGCATCCCTTTACCCGGGTTGCATTGCCACAACAGGCTTGTTCAGGGAGCACATTCCCTTGTTCAGAACTCTGTTCCCACCATTTCAAAAGTACATAACCAAAGGTTTTGTCTCAGAAGATGAAGCAGGACAGAGACTCGCTCAGGTTGTGAGTGATCCAAGCCTAACAAAATCCGGGGTTTACTGGAGCTGGAACAAGAACAATGCTTCATTTGAAAATGAGTTGTCCCAGGAAGCTAGTGATGAAGCAAAGGCTCGCAGGGTCTGGGAAATTAGTGAGAAACTGGTGGGTTTGGCCTAA 1182 0.4695 MALLATSLIPASFSIPKEVKSSTFGVSLSHTTKSDFNSYAVRSKQRELQQKIGAVRAQTVATTTPAFTKVAPEGKKTLRKGSVVVTGASSGLGLAAAKALAETGKWHVIMACRDFLKTARAAKSAGIAKENYTIMHLDLASLDSVHQFVNNFRQSGRPLDVLVCNAAVYLPTAREPTFTADGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSRRMIIVGSITGNTNTLAGNVLPKANLGDLRGFAGGLNGLNTSSMIDGGNFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGFVSEDEAGQRLAQVVSDPSLTKSGVYWSWNKNNASFENELSQEASDEAKARRVWEISEKLVGLA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0573 393 PRINTS Glucose/ribitol dehydrogenase family signature 82 99 IPR002347 -
Lal2g0573 393 PRINTS Glucose/ribitol dehydrogenase family signature 157 168 IPR002347 -
Lal2g0573 393 PRINTS Glucose/ribitol dehydrogenase family signature 290 307 IPR002347 -
Lal2g0573 393 Pfam short chain dehydrogenase 83 225 IPR002347 -
Lal2g0573 393 Gene3D - 68 393 - -
Lal2g0573 393 CDD LPOR_like_SDR_c_like 80 392 - -
Lal2g0573 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 361 IPR036291 -
Lal2g0573 393 PANTHER - 1 392 IPR005979 GO:0016630
Lal2g0573 393 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 392 - -
Lal2g0573 393 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 79 393 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0573 Lal-Chr2 3458738 3463021 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0573 K00218 - jre:109013446 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0573 2 3458738 3463021 Lal2g0573 2 3458738 3463021 ECH