Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0541 ATGAGGTTTATTATTATTATTGTTATTGTAAACCTTATAGGCCAACTCTTTGTAATTGTGAAGACAGAATCAATAAGTAGAGCAGATTTTCCAGAAGGGTTTATATTTGGAACTGCTTCTTCAGCTTATCAGTTTGAGGGAGCTGTTGATGAAGGAAATAAAGGACTTAGCATATGGGATACTTTCTCAAAGAAACCAGGGAGAATTCTGGACTTCAGTAATGCAGATATGGCAGTGGATCAATATCACCGATTTGAGCATGATATAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCTTGGACTAGAATTTTCCCAAATGGAACAGGGGAACCTAATGCAGAGGGCATAATATATTATAACAGACTCATTGATGCTTTACTAGAAAAAGGAATTCAGCCTTTTGTAACACTATATCATTGGGATCTTCCACAGATGCTTGAAGATAAATATGAAGGATGGCTAAGCACACAAATAATAAAAGATTTTGAGCATTATGCGTATACCTGCTTCCAAGCTTTTGGCGATCGAGTTCAACACTGGATTACCTTCAATGAACCTCATAACTTTGCCATCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTCTGGGCCATCTTATTTGTAAGAAGGGGAAATCGTCCACTGAACCATACATTGTTGCTCATAACATTCTCTTATCCCATGCTGCAGCCTATCGAAGTTACCAACTACATTTCAAGGAAAGACAAGGAGGTCAAATAGGGATAGCACTAGATGCCATTTGGTATGAGCCCATAACTGATCTTGATGAAGACAAAGATGCAGCAGCTAGAGCTAGGGACTTTTCACTTGGTTGGTTCCTTGACCCGCTTTTCTTTGGAAAATATCCTATCTCAATGAAAAAACTTGTAGCTGAGAGATTACCAGAGATTTCTGATGCAGCCTCAAACTTGCTGGTGGGATCATTGGATTTTATTGGCATAAATCACTATACCTCATTATATACTCGTAACGACAGGACTCGGTCTCATAAACTGGTTATGCAAGATGCTTTGGCTGATGCTGCTGTTATCACAACCGCATATCGAAGAGGAGCTGCAATTGGAGAAAAGGCTGCCTCAAGTTGGTTGCACATTGTACCATGGGGCATAAGAGAGTTGGTAAAATATGTGAAGATAAAATATGGGAACACCCCTATAATTATAACAGAAAATGGAATGGATGAAAAAAGCAAACCCTTTATGACCTTAGAAAATGCCTTAAAAGATGACAAGAGGATAATGTACCATAGGGACTATCTCTCAAATCTATCTGCTGCTATAAGGGAAGATGGTTGCAATGTACATGGTTACTTTGTGTGGTCATTGCTTGACAATTGGGAGTGGAACTTGGGTTATACTGTCCGGTTTGGACTCTACTATGTAGATTTTAAGAATAACCTTACTAGGATACCAAAGGCTTCAGTGCAATGGTTCAAAGACATGCTTAAATTAGAAACAGAAGGAGTCAGTGTAATGTAA 1530 0.3863 MRFIIIIVIVNLIGQLFVIVKTESISRADFPEGFIFGTASSAYQFEGAVDEGNKGLSIWDTFSKKPGRILDFSNADMAVDQYHRFEHDINLMKDLGMDSYRFSISWTRIFPNGTGEPNAEGIIYYNRLIDALLEKGIQPFVTLYHWDLPQMLEDKYEGWLSTQIIKDFEHYAYTCFQAFGDRVQHWITFNEPHNFAIHGYDLGIQAPGRCSLLGHLICKKGKSSTEPYIVAHNILLSHAAAYRSYQLHFKERQGGQIGIALDAIWYEPITDLDEDKDAAARARDFSLGWFLDPLFFGKYPISMKKLVAERLPEISDAASNLLVGSLDFIGINHYTSLYTRNDRTRSHKLVMQDALADAAVITTAYRRGAAIGEKAASSWLHIVPWGIRELVKYVKIKYGNTPIIITENGMDEKSKPFMTLENALKDDKRIMYHRDYLSNLSAAIREDGCNVHGYFVWSLLDNWEWNLGYTVRFGLYYVDFKNNLTRIPKASVQWFKDMLKLETEGVSVM 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0541 509 PANTHER BETA-GLUCOSIDASE 41-RELATED 18 499 - -
Lal2g0541 509 Gene3D Glycosidases 16 501 - -
Lal2g0541 509 PANTHER GLYCOSYL HYDROLASE 18 499 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 34 48 IPR033132 -
Lal2g0541 509 SUPERFAMILY (Trans)glycosidases 17 499 IPR017853 -
Lal2g0541 509 Pfam Glycosyl hydrolase family 1 28 500 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 PRINTS Glycosyl hydrolase family 1 signature 325 339 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 PRINTS Glycosyl hydrolase family 1 signature 403 411 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 PRINTS Glycosyl hydrolase family 1 signature 426 437 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 PRINTS Glycosyl hydrolase family 1 signature 448 465 IPR001360 GO:0004553|GO:0005975
Lal2g0541 509 PRINTS Glycosyl hydrolase family 1 signature 472 484 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0541 Lal-Chr2 3254911 3258899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0541 20 445 Glycoside Hydrolase AT5G54570 73.536 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0541 K01188 - gmx:100783543 889.026