Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0536 ATGGCTGGTCGTGGCAAAACCCTAGGATCTAGCAGCGCCAAGAAGGCAACCTCAAGAAGCAGCAAGGCCGGTCTTCAATTTCCGGTCGGCCGTATTGCCCGGTTCCTCAAGGCCGGAAAATATGCCGAGCGTGTCGGCGCTGGTGCCCCTGTATATCTCGCCGCCGTTCTCGAATATCTCGCTGCTGAGGTTCTGGAGTTGGCTGGAAACGCAGCAAGAGATAACAAGAAGACAAGAATAGTTCCAAGGCACATCCAATTAGCAGTGAGGAATGATGAGGAACTGAGCAAGCTTCTTGGACAAGTCACTATTGCTAATGGTGGTGTCATGCCCAATATTCACAACCTCCTTCTCCCTAAGAAACCTGCTTCATCCAAGCCTGCTGATGATGAATGA 396 0.5126 MAGRGKTLGSSSAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGQVTIANGGVMPNIHNLLLPKKPASSKPADDE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0536 131 CDD H2A 9 121 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 ProSitePatterns Histone H2A signature. 23 29 IPR032458 -
Lal2g0536 131 Gene3D Histone, subunit A 1 128 IPR009072 GO:0046982
Lal2g0536 131 Pfam C-terminus of histone H2A 93 126 IPR032454 -
Lal2g0536 131 PANTHER HISTONE H2A 2 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 SUPERFAMILY Histone-fold 10 125 IPR009072 GO:0046982
Lal2g0536 131 PANTHER HISTONE H2A.6 2 127 - -
Lal2g0536 131 MobiDBLite consensus disorder prediction 1 23 - -
Lal2g0536 131 PRINTS Histone H2A signature 15 37 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 PRINTS Histone H2A signature 44 59 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 PRINTS Histone H2A signature 59 72 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 PRINTS Histone H2A signature 73 87 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 PRINTS Histone H2A signature 101 119 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 SMART h2a4 4 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Lal2g0536 131 Pfam Core histone H2A/H2B/H3/H4 7 90 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0536 Lal-Chr2 3227126 3232676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0536 K11251 - thj:104813407 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0536 2 3227126 3232676 Lal2g0536 2 3227126 3232676 ECH