Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0531 ATGGCAACCATGGCTTCTACCATCACTACCATAACCCCATCAAACCCATTTCCCCTCTTCCAAAAGTCATCATTCCATGGCACCCCATCCAACCTTCGCCTTCAACCCACCAAAACACACGCTTCTGCGCGTGTGTCCATGTCAGCACCATCATCTCCACCACCCTACAACCTCAACTCCTTCACCTTCGAGCCCATCAAGGAATCAATCGTGTCACGCGAGATGACACGTAGGTACATGACAGACATGGTCACATACGCTGACACCGACGTTGTTATAGTCGGTGCTGGTTCCGCTGGATTAACATGTGCCTATGAGCTCAGCAAGAACCCTAACGTTCAGATTGCGATCATCGAACAATCGGTTAGCCCTGGTGGTGGCGCTTGGCTCGGTGGCCAACTCTTCTCTGCCATGGTTGTCCGAAAGCCAGCACATAGGTTCCTAGATGAGGTTGGTGTTGAGTATGATGAGATGGACAACTACGTAGTGATTAAGCATGCTGCTCTATTCACTTCCACCATCATGAGCAAGCTTCTTTCTAGGCCTAACGTGAAGCTCTTCAATGCTGTAGCAGCTGAGGATTTGATTGTTAAGAATGGCAAAGTTGGTGGGGTTGTTACCAATTGGGCTTTGGTTTCAATGAACCATGATACTCAATCATGCATGGACCCTAATGTTATGGAAGCTAAGGTGGTTGTGTCCTCTTGTGGCCATGATGGTCCTTTTGGAGCCACTGGGGTAAAGAGGCTTAAGAGTATTGGCCTCATTGATACTATCCCTGGAATGAAGGCTCTTGACATGAACACTGCTGAAGATGCCATTGTGAGACTCACTAGGGAGGTTGTGCCTGGAATGATTGTTACTGGGATGGAAGTTGCTGAGATTGATGGTGCTCCAAGAATGGGTCCAACATTTGGAGCAATGATGATATCAGGGCAGAAAGCAGCCCATCTAGCATTGAGGTCACTGGGTCTTCCAAATGCTTTGGATAAAGTAGGAAACATCCACCCTGAGCTTGTTCTAGCTGCTGCTGAATCTGCTGAAATTGTTGATGCTTGA 1059 0.4797 MATMASTITTITPSNPFPLFQKSSFHGTPSNLRLQPTKTHASARVSMSAPSSPPPYNLNSFTFEPIKESIVSREMTRRYMTDMVTYADTDVVIVGAGSAGLTCAYELSKNPNVQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHRFLDEVGVEYDEMDNYVVIKHAALFTSTIMSKLLSRPNVKLFNAVAAEDLIVKNGKVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDTIPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNALDKVGNIHPELVLAAAESAEIVDA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0531 352 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 7 332 IPR027495 GO:0009228
Lal2g0531 352 Gene3D - 88 323 IPR036188 -
Lal2g0531 352 Gene3D - 57 87 - -
Lal2g0531 352 Pfam Thi4 family 72 305 - -
Lal2g0531 352 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 7 352 - -
Lal2g0531 352 SUPERFAMILY FAD/NAD(P)-binding domain 44 316 IPR036188 -
Lal2g0531 352 PANTHER THIAMINE THIAZOLE SYNTHASE 7 352 - -
Lal2g0531 352 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 68 322 IPR002922 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0531 Lal-Chr2 3195372 3198200 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0531 K03146 - gmx:547462 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0531 2 3195372 3198200 Lal2g0531 2 3195372 3198200 ECH