Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0529 ATGTGGAGAGACCCTGGAGCTCCCGCTGATTCTTTCTATGAAGTCCGCCCTGAGTGCACTGATGTCCCCAAGTCTCGGTTTAGGATCAAGGCTGGTAAGACACTAAGTGCAAGAAAGTGGCATGCTGCTTTTTCTCCAGAAGGGTATCTGGATATAGGCAAGACTCTAAGCCGAATTCACCGAGGGGGAATCCACCCATCAATTAGAGGAGAAGTTTGGGAATTTCTACTTGGCTGCTATGATCCGAAGAGTACGTTTGAGGAAAGAGAAGAGATAAGGCAACAACGAAGGTTGAAATATGCTGCATTGAAGGAAGAATGCCGCCACTTGTTTCCTCTTGTGGGAAGTGGTAAATTTATCACAGCTCCTGTAATTACTGAAGATGGTATACCAATTCTAGATCCGTTGGTTCTGTTAGAAACAAATACAGACAATGGAGTGGTTGTACCACCTCAAGATAATAATGCAGGTAGTACCATGGCCCCTTCAAGCACTGGTGCTAACTTAGAAAAGGTGACAGACAAGAGAACAATCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGACGTGAATCGCACTGATAGGACACTGGTTTTTTATGAGAAGAAAGAGAACTTGTCAAAACTCTGGGATATTCTTGCTGTATATGCTCGGATAGATACAGATGTTGGCTATGGTCAAGGAATGAGTGACCTATGCTCCCCTATGATAATGCTTCTTAATGATGAAGCTGATGCATTTTGGTGTTTTGAACGTCTGATGCGTAGACTGCGGGGAAACTTCAGATGCACCGATAACTCTGTTGGGGTGGAGACTCAACTAACTAATTTGGCATTGATTACTCAAGTAATTGATCCAAAACTTCATGAACATTTAGAGCATATTGGTGGAGGTGACTATCTGTTCGCTTTTCGGATGCTAATGGTTCTTTTTCGTCGAGAATTCTCCTTTTGCGACTCATTGTACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCGGACTTGTTCAATATATATGAAGATTCTGAGGATGAAAAATCCGAGGAATCTAAAGGAAGATTAAAATCAATACGTCATTATGGGAAGTTCGAGAGAGAAAACATGAAAAATGGAGCAAAGAATGGCGAAGAAGCTCCTCTTCCCATATCTGTTTTCCTTGTCGCTAGTGTGTTGAAAGAAAAAAGTGCAATACTACTACAACAAGCGCGAGGCCTGGATGATGTTGTCAAGATATTGAATGATGTAAATGGAAATCTGGATGCCAAAAAAGCTTGCATTGCAGCACTGAAACTTCACAAGAAATATTTGAAAAAG 1320 0.4167 MWRDPGAPADSFYEVRPECTDVPKSRFRIKAGKTLSARKWHAAFSPEGYLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYDPKSTFEEREEIRQQRRLKYAALKEECRHLFPLVGSGKFITAPVITEDGIPILDPLVLLETNTDNGVVVPPQDNNAGSTMAPSSTGANLEKVTDKRTIQWMLTLHQIGLDVNRTDRTLVFYEKKENLSKLWDILAVYARIDTDVGYGQGMSDLCSPMIMLLNDEADAFWCFERLMRRLRGNFRCTDNSVGVETQLTNLALITQVIDPKLHEHLEHIGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFNIYEDSEDEKSEESKGRLKSIRHYGKFERENMKNGAKNGEEAPLPISVFLVASVLKEKSAILLQQARGLDDVVKILNDVNGNLDAKKACIAALKLHKKYLKK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0529 440 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 270 437 IPR035969 -
Lal2g0529 440 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 440 - -
Lal2g0529 440 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 292 IPR035969 -
Lal2g0529 440 SMART tbc_4 60 356 IPR000195 -
Lal2g0529 440 Gene3D - 268 440 - -
Lal2g0529 440 Pfam Rab-GTPase-TBC domain 168 332 IPR000195 -
Lal2g0529 440 ProSiteProfiles TBC/rab GAP domain profile. 63 332 IPR000195 -
Lal2g0529 440 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 163 262 - -
Lal2g0529 440 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0529 Lal-Chr2 3185040 3190526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0529 - - gmx:100782079 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0529 2 3185040 3190526 Lal2g0529 2 3185040 3190526 ECH