Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0525 ATGGCTCAATTACTATCTCCAGTGTACACAGAAGCTCTCAAAGTTCAGAACCCATCACTGAGTTTTTGTTCAAGTAGCTCATGGAGGATGTTGCCAAAATCTGCAAATACTTGGAACTTTGCAACAAACAGTGGCAAGAAAAGAGGATGTGGCAGGGTCAGAGTTGCTACTGAGGACTCTTTTTCTCTAACTGATACTGTTGCAGATGACTATTATTCAGTTTTGGGTCTGCTCCCAGATGCTACACCAGCACAGATAAAGAAGGCCTATTACAATTGCATGAAAGCATGCCACCCTGACTTGAGTGGCAATGATCCTGAGACCACGAATTTCTGCACCTTCATCAATGAAGTTTATGCGGTGCTCAGTGATCCTGTTCAGCGCATGGTTTATGATGAAATTCATGGGTATTCTTTGACTTCAATCAATCCTTTCCTCGATGATTCTAGCTCAAAGGATCATGTTTTTGTTGATGAATTCAGTTGCATAGGCTGCAAAAATTGTGCCAATGTAGCCCCTGATGTGTTTGCAATAGAGGAAGACTTTGGTAGAGCCAGAGCATACACCCAATGCGGGAAATCAGAATTAGTTCAACAGGCAATTGAGACTTGCCCTGTTGACTGTATTCATTGGACATCAGCTGCACAACTATCATTACTTGAAGACGAAATGCGTCGTGTGGAAAGAGTAAATGTTGCCTTGATGCTTACAGGCATGGGATCAGCATTAAATGACGTTTTCAGAATGGCAAGTTCTCGATGGGAAAGGAGGCAGTCAAAAATTTTGGAACAAGCAAGATTAAGGATGATGAATAAACAAGGTTCCAACAACACAGATTCATACTGGGACACTCTTTGGGGAAAACCGAAGGACTACCAAACTTCAGATTATTTGTTTATGCTTCAGAGTGTTACAAATGGAAACAATTTTACAGAGGAGGAAGTGAAGGAAAGAGAAAAAAGAGCTGCTGCTGCTGCCAGAAGATGGAGGGAGTACTCAAGGAAGGGTGGTGTTGATAAAGCTCCTACATTTAAACTTCCAGAGGCAGCCTCCAACAATGACAAGTGA 1068 0.4213 MAQLLSPVYTEALKVQNPSLSFCSSSSWRMLPKSANTWNFATNSGKKRGCGRVRVATEDSFSLTDTVADDYYSVLGLLPDATPAQIKKAYYNCMKACHPDLSGNDPETTNFCTFINEVYAVLSDPVQRMVYDEIHGYSLTSINPFLDDSSSKDHVFVDEFSCIGCKNCANVAPDVFAIEEDFGRARAYTQCGKSELVQQAIETCPVDCIHWTSAAQLSLLEDEMRRVERVNVALMLTGMGSALNDVFRMASSRWERRQSKILEQARLRMMNKQGSNNTDSYWDTLWGKPKDYQTSDYLFMLQSVTNGNNFTEEEVKEREKRAAAAARRWREYSRKGGVDKAPTFKLPEAASNNDK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0525 355 CDD DnaJ 70 124 IPR001623 -
Lal2g0525 355 SUPERFAMILY Chaperone J-domain 70 160 IPR036869 -
Lal2g0525 355 MobiDBLite consensus disorder prediction 326 355 - -
Lal2g0525 355 SUPERFAMILY 4Fe-4S ferredoxins 154 211 - -
Lal2g0525 355 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 153 181 IPR017896 -
Lal2g0525 355 SMART dnaj_3 69 127 IPR001623 -
Lal2g0525 355 Pfam 4Fe-4S single cluster domain of Ferredoxin I 157 211 - -
Lal2g0525 355 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 355 - -
Lal2g0525 355 Pfam DnaJ domain 70 132 IPR001623 -
Lal2g0525 355 Gene3D DnaJ domain 56 146 IPR036869 -
Lal2g0525 355 PRINTS 3Fe-4S ferredoxin signature 157 168 IPR001080 GO:0005506|GO:0009055
Lal2g0525 355 PRINTS 3Fe-4S ferredoxin signature 168 178 IPR001080 GO:0005506|GO:0009055
Lal2g0525 355 PRINTS 3Fe-4S ferredoxin signature 197 209 IPR001080 GO:0005506|GO:0009055
Lal2g0525 355 PRINTS DnaJ domain signature 72 90 IPR001623 -
Lal2g0525 355 PRINTS DnaJ domain signature 90 105 IPR001623 -
Lal2g0525 355 PRINTS DnaJ domain signature 107 127 IPR001623 -
Lal2g0525 355 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Lal2g0525 355 PANTHER OS01G0730500 PROTEIN 1 355 - -
Lal2g0525 355 Gene3D - 153 213 - -
Lal2g0525 355 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0525 Lal-Chr2 3154554 3161314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0525 - - pvu:PHAVU_005G094000g 523.472