Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0511 ATGGCTTTTCAAGTCACATCTCGAACTCTTCAAGATGCCACCATGTATATGAGGCATGAACAATGGATGATTCGCCATGGCAAACTCCATAAGGACCCCAAGAAAGAGAGAATCGCTTCAGAATATTTAAGGAAAATAGATCAATATAAATCTGATTTGCTCCTTGAGAACGATATCCCGGGCCACATGTGTTCCTCAATCATAAAGACAAACTCTTTTAAGTATGAAAATGTGACTTCACTACCATCCATGGTCGATTGGAGACAAAAAGGTGCAGTGACGCCCGTCAAGGACCAAGGCCAGTGTGGATGTTGTTGGGCATTTTCTGCTGTGGCAGCAACCGAAGGAATCAATAAGTTGAGCACCGGAACATTAATTTCATTGTCTGAACAAGAGTTGGTTGATTGTGATACAAAGGGTGTTGACCAAGGCTGTGAAGGTGGTCTAATGGATGATGCATTCAAATTCATCATAAAAAATAATGGACTAAACACTGAAGCCAATTACCCCTATCAAGGTGTTGACGGAACATGCAATGCAAATGAAGCAACCAACTATGCAGCTACCATTACCGGGTATGAAGATTTCCCTGCAAACAACGAGCAGGCACTGCAAAAAGCTGTGGCTAATCAACCTATTTCTGTAGCCATTGATGCTAGTTGTGACACTCAGCTAGATCATGGTGTAACCACGGTTGGTTATGGAGTTACTATAGATGGAACTAAGTATTGGTTGGTTAAGAATTCATGGGGAAGTGAGTGGGGTGAAGCAGGATATATTAGGATGCAAAGGGATGTGGCTGCTAGTGAAAGACTTTGTGGCATTGCAATGCAAGCTTCTTACCCAACTGCATAA 855 0.4234 MAFQVTSRTLQDATMYMRHEQWMIRHGKLHKDPKKERIASEYLRKIDQYKSDLLLENDIPGHMCSSIIKTNSFKYENVTSLPSMVDWRQKGAVTPVKDQGQCGCCWAFSAVAATEGINKLSTGTLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIKNNGLNTEANYPYQGVDGTCNANEATNYAATITGYEDFPANNEQALQKAVANQPISVAIDASCDTQLDHGVTTVGYGVTIDGTKYWLVKNSWGSEWGEAGYIRMQRDVAASERLCGIAMQASYPTA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0511 284 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 99 110 IPR000169 -
Lal2g0511 284 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 225 235 IPR025660 -
Lal2g0511 284 CDD Peptidase_C1A 82 282 IPR039417 -
Lal2g0511 284 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 243 262 IPR025661 -
Lal2g0511 284 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 56 283 - -
Lal2g0511 284 Gene3D Cysteine proteinases 3 284 - -
Lal2g0511 284 Pfam Papain family cysteine protease 81 283 IPR000668 GO:0006508|GO:0008234
Lal2g0511 284 PRINTS Papain cysteine protease (C1) family signature 99 114 IPR000668 GO:0006508|GO:0008234
Lal2g0511 284 PRINTS Papain cysteine protease (C1) family signature 227 237 IPR000668 GO:0006508|GO:0008234
Lal2g0511 284 PRINTS Papain cysteine protease (C1) family signature 243 249 IPR000668 GO:0006508|GO:0008234
Lal2g0511 284 SUPERFAMILY Cysteine proteinases 11 283 IPR038765 -
Lal2g0511 284 PANTHER - 56 283 - -
Lal2g0511 284 SMART pept_c1 81 283 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0511 Lal-Chr2 3059054 3060769 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0511 - K16292 gmx:102666929 442.195