Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0500 ATGAAGAGAACTACAACATTAACCTATGTTATCTACAATCTTCTTATGATTGCGTGCAATCTATGGATGGGTGCAAGTGAATGTCCTGAAACGCATAAGAATATTACATCTGACCCGAATGTGATGAGGAAGAAGTTTGACAATTGGTTGAAACACCATGGTCGCCGATACAAAGATCAAGAAGAATGGGAAGTCCGTTTCGGCATTTACCAAGCAAATCTCGAGTTTATAGAGTGCATCAACTCTCAAAACCATTCCTACAAGCTCATAGACAACAAATTTTCAGACCTTACAAACAATGAGTTTTCAAGTACCTATCTTGGTTTCAAAACAAAGTCACATTCACATACAGGATTCAGGTATCTTGAACATGGGGATCTTCCAGAAAGCAAGGATTGGAGGAAGGAAGGTGCAGTGACTGATATCAAGGATCAAGGCCAATGTGGAAGTTGTTGGGCATTCTCTGCAGTAGCGGCTGTAGAGGGCATCAACAAAATAAAAACAGGAAACTTGGTTTCTCTATCTGAACAAGAACTGATAGATTGTGATGTTAACAATGGGAACCAAGGCTGCCAAGGTGGCTTAATGGAAACAGCATTTACATTCATCAAGAAGAATGGAGGACTTACCACTGAGGAAGACTATCCTTATCAAGGGGCAGATGGTATCTGCAGTAAGGAAAAAGCTGAACATCATAATGTCACTATAAGCGGCTACGAAAATGTACCTGTTAGTAATGAGGCTATGCTGAAAGCTGCAGCTGCTAACCAACCTGTCTCCGTTGCGATTGATGCTGGAGGTTATGCATTTCAACTTTACTCAGAAGGTGTTTTTTCTGCCCTGTGTGGAAAGCAACTCAATCATGGCGTCACTATAGTCGGGTATGGAGAAGATACTCAGAATTATTGGATTGTGAAGAATTCATGGGGTGCTGATTGGGGTGAATCTGGTTACATTAGGATGAAGCGTGATGTTTTGGATAAAGATGGCATTTGTGGCATTGCCATGCAAGCTAGCTATCCTCTCAAGAATTAA 1035 0.4116 MKRTTTLTYVIYNLLMIACNLWMGASECPETHKNITSDPNVMRKKFDNWLKHHGRRYKDQEEWEVRFGIYQANLEFIECINSQNHSYKLIDNKFSDLTNNEFSSTYLGFKTKSHSHTGFRYLEHGDLPESKDWRKEGAVTDIKDQGQCGSCWAFSAVAAVEGINKIKTGNLVSLSEQELIDCDVNNGNQGCQGGLMETAFTFIKKNGGLTTEEDYPYQGADGICSKEKAEHHNVTISGYENVPVSNEAMLKAAAANQPVSVAIDAGGYAFQLYSEGVFSALCGKQLNHGVTIVGYGEDTQNYWIVKNSWGADWGESGYIRMKRDVLDKDGICGIAMQASYPLKN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0500 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 286 296 IPR025660 -
Lal2g0500 344 Pfam Papain family cysteine protease 127 341 IPR000668 GO:0006508|GO:0008234
Lal2g0500 344 SMART Inhibitor_I29_2 46 102 IPR013201 -
Lal2g0500 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 145 156 IPR000169 -
Lal2g0500 344 SUPERFAMILY Cysteine proteinases 42 342 IPR038765 -
Lal2g0500 344 Gene3D Cysteine proteinases 24 344 - -
Lal2g0500 344 PANTHER ERVATAMIN-B-LIKE 27 343 - -
Lal2g0500 344 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 343 - -
Lal2g0500 344 SMART pept_c1 127 342 IPR000668 GO:0006508|GO:0008234
Lal2g0500 344 PRINTS Papain cysteine protease (C1) family signature 145 160 IPR000668 GO:0006508|GO:0008234
Lal2g0500 344 PRINTS Papain cysteine protease (C1) family signature 288 298 IPR000668 GO:0006508|GO:0008234
Lal2g0500 344 PRINTS Papain cysteine protease (C1) family signature 302 308 IPR000668 GO:0006508|GO:0008234
Lal2g0500 344 Pfam Cathepsin propeptide inhibitor domain (I29) 46 102 IPR013201 -
Lal2g0500 344 CDD Peptidase_C1A 128 341 IPR039417 -
Lal2g0500 344 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 302 321 IPR025661 -
Lal2g0500 344 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0500 Lal-Chr2 3004938 3006255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0500 - - gmx:121173133 520.776