Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0495 ATGGATAACAACCGCGTTTCACGTAGAACCAAAATTCTCACCGGCCACCTCCATCCTTCACCTTCCACCACAACCTCCACCCTCTCCTTCACCCCATGCCTCAACTACTCCCCTCCCGAACTCTCCAACCCATTCGTGTTCAACGTTCGTGAGATGCGTACCCTAATGGACGGTCATAACCTCGAAGATCGAGATTGGATATTCAATCTCATAATACAAAGCGATCTCTTCAACCGAAGAGAACAAGGAGGGAGGGTCTTCGTCTCACCAGATTTCAACCAAACCATGGAACAGCAGAGAGAGATCACAATGAAGCGAATCGAGTATCTCAGAGATCATGGAGTATTCAAAGGTTGGCTCACTGATGATGGGCCTGAAGCTGATTTGAGGAAAATGGCGCTACACGAGGTTATTGGGATGTATGATCATTCTCTCGGTATTAAGATTGGAGTCCATATCTTCTTATGGGGTGGGGCTGTAAAGTTTCTGGGAACCAAGCGCCATCATGACAAGTGGCTGAAATCTACTGAAAACTATGAGATGAAGGGTTGTTTTGCTATGACTGAGTTGGGCCATGGAAGTAATGTCAGAGGAATTGAAACAATCACTACCTATGATTCAAACACAGGAGAATTTGTCATCAATACTCCATGTGAATCAGCTCAGAAGTATTGGATCGGTGGTGCAGCAAATCATGCAACACACACTATAGTCTTTTCACATCTCAACATAAATGGAAGCAATCAAGGGGTGCATGCATTTATTGCCCAAATAAGGGATTCAGATGGAAAAATATGTCCAAATGTCCGAATAGCTGATTGCGGTCACAAAATTGGTTTAAATGGAGTCGATAATGGTCGTATCTGGTTTGACAATGTGAGAATACCTAGAGAGAATTTATTAAATTCCGTAGCTGATGTTTCACCAGCTGGTGAATATTTGAGTGCAATAAAAAATCCAGAGCAGAGATTTGGAGCTTTTCTTGCCCCTTTGACCTCTGGTCGTGTGACTATTGCCGCCAATGCTGTTTATGTCTCTAAGATTAGCATAGCCATTGCTATAAGATATGCATTAACAAGGCGGGCATTTTCTATCACACCAAATGGACCTGAAACTTTACTGCTTGATTACCCAAGTCATCAGCGACGTCTATTACCTTTACTTGCAAAGATATATGCATTAAGTTTTGCTGCAATTGAGCTCAAAATGCTGTATGTGAAACGAACGCCTGAGTCAAACAAAGCCATTCATATTGTTTCTAGTGCATACAAGGCTATTACGACATGGAATAATATGCGTACTCTTCAGGAATGTCGTGAAGCTTGTGGAGGACAAGGCCTTAAAACTGAAAATCGTATTGGTCATTTCAAGGGTGAATTTGATGTGCAATTGACATTTGAGGGGGACAACAATGTTTTGATGCAGCAGATCAGCAAGGCACTCCTTGCAGAATATATAGCTCATGAGACAAGAAACAAGCCATTTAAAGGTTTGGGATTAGAACACATGAACCACCCTTTGCCTGTCATCCCATCTCAGCTAACAAGTTCTATTGTCAGGAGCAGTGAATTTCAGATTAATCTGTTCCACCTAAGAGAGCGAGATCTATTGAGACGTTTTGCTGCAGAGGTTTCACAATATCAAGCTCGGGGAGAAAGCAAAGAATCTGCCTTCGTTCAAAGTTATCAGATTGCAGAGGACTTAGGCAGAGCTTTCTCAGAACGGGCAATACTGAAAACCTTCTTGGAGGCTGAGTCAAAAGTATCACCTGGTGCATTGAAGGATGTGTTGGGTCTATTGAGAACACTGTATGCGTTGGTTTCTGTGGATGAAGATTCTTCTTTTCTTCGATATGGGTACTTGTCAACAGAGAATGCTGCTGCAGTGAGGAAAGAAGTGCCAACACTCTGTGCTGAACTTCGACCACATGCACTTGCCTTGGTCAGTTCCTTTGGTATTCCTGATGCCTTCTTGAGTGCTATAGCATATGACTGGGTTGATTCAAATTCTTGGTCTTCTACTCAACATTAG 2031 0.4269 MDNNRVSRRTKILTGHLHPSPSTTTSTLSFTPCLNYSPPELSNPFVFNVREMRTLMDGHNLEDRDWIFNLIIQSDLFNRREQGGRVFVSPDFNQTMEQQREITMKRIEYLRDHGVFKGWLTDDGPEADLRKMALHEVIGMYDHSLGIKIGVHIFLWGGAVKFLGTKRHHDKWLKSTENYEMKGCFAMTELGHGSNVRGIETITTYDSNTGEFVINTPCESAQKYWIGGAANHATHTIVFSHLNINGSNQGVHAFIAQIRDSDGKICPNVRIADCGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPAGEYLSAIKNPEQRFGAFLAPLTSGRVTIAANAVYVSKISIAIAIRYALTRRAFSITPNGPETLLLDYPSHQRRLLPLLAKIYALSFAAIELKMLYVKRTPESNKAIHIVSSAYKAITTWNNMRTLQECREACGGQGLKTENRIGHFKGEFDVQLTFEGDNNVLMQQISKALLAEYIAHETRNKPFKGLGLEHMNHPLPVIPSQLTSSIVRSSEFQINLFHLRERDLLRRFAAEVSQYQARGESKESAFVQSYQIAEDLGRAFSERAILKTFLEAESKVSPGALKDVLGLLRTLYALVSVDEDSSFLRYGYLSTENAAAVRKEVPTLCAELRPHALALVSSFGIPDAFLSAIAYDWVDSNSWSSTQH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0495 676 Pfam Acyl-CoA oxidase 524 660 IPR002655 GO:0003997|GO:0005777|GO:0006635
Lal2g0495 676 Gene3D - 183 319 IPR046373 GO:0016627
Lal2g0495 676 Gene3D - 523 652 - -
Lal2g0495 676 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 85 309 IPR009100 GO:0016627
Lal2g0495 676 Pfam Acyl-CoA dehydrogenase, middle domain 184 293 IPR006091 GO:0016627
Lal2g0495 676 Pfam Acyl-CoA dehydrogenase, C-terminal domain 327 482 IPR009075 GO:0016627
Lal2g0495 676 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 323 494 IPR036250 GO:0016627
Lal2g0495 676 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 8 672 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lal2g0495 676 Gene3D - 330 490 - -
Lal2g0495 676 PIRSF Acyl-CoA_oxidase 31 676 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lal2g0495 676 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 520 661 IPR036250 GO:0016627
Lal2g0495 676 PANTHER ACYL-COENZYME A OXIDASE 3.2, PEROXISOMAL-RELATED 8 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0495 Lal-Chr2 2978411 2985119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0495 1 674 Acyl Lipid Metabolism Gene Families AT1G06290 72.000 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0495 K00232 - gmx:100780811 1129.01