Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0436 ATGTTTAGGTTTTCTTGTTTCCAAGCTCAGCTCCAAAATAACAAGGAAAAGAAAATATTTCAATCTTCTTCTGAAGCAATGGCAAAGGCTATGCAAGATGATTTGCCAAAGAAAGTCTCTAACTGTTCCTCCTCTATCACTAGAAGCTCAAATCTACGCCCCTTGAAGGCACAAGTACACAAGCAAATGAATATCAATGGGAATCACATTAGCAATCAGGATTCAGTTGAGCACATTTATAGGTCAGAGGATCTGGATAGCAAATTTTCATTTGAAAGTCATGTAGAAGTTCACCAAACCAGGCTTCTCAAGAAAAGTCATTCTCTTGCAAGTGGACTTCACCAAAAGGGCAGCCTATATACCGACCACATAAACGAGTATGATGCAGATCAGGATTTTTCTTTTAATGGTTCCAAAAGTCAGAATGAGTCGTCAGTTTCAGTTTGCGGACAAGATCATGACATCATACCCACTGATCAGTGTAAAAAGAATCCAAACCCTGAGGTTCAAGTCAGTTCAGCTCTTGCAATTGATGGCTCAATTTCTCCAATAGGAGATCCGACATCTTCTCTTGAAATTTCTGATACTCCATTATCTGCTGAATTTGCTGGCGACTCTGCCGAGCAAACTTCTGGTCCCAGTACCCCATCTTTAATGGAGTCACGTTCTTTACCCGATTTCTTAGATCCTGCACTTTATTCTGGAGCATACGCTTTTAAACACCCACCATCAATTTCAAGATCTTCTAATGATCTTCATGCTTTAGGCAAGAGGCTGAAAGAGGTATTCATCAATGAGTCAGATTGTCAAATAAGAGGAGATCAAGAAAGAGAGAATGATATAGGAAACATCAAAGAGAGTAGTCATATGGATAGTTACCTCAATGATGGTGGTGATTCTTACCTGATTTCAGGTTCAGCAAAAGACCGGGTAATGCCAACTATAGATGAGATGAGAGATATTGAAACCCTTCGAAGAGTTTCTTCAAGTGATTGCTTTGGTGAATATCCTAACAAGGATTTTAAGATTAAGCGCATTGAGGATTGGGTAATAAGTCTCGAGCATTGTGGACCGCCTCCAGAGATAATAAATGAGTTGCCTGAATCTGTAGATCCCGTCATTGATGGCAACACCAAAAATGGTGTGACTGCTGCCGAGGTGGACCATAAGGTCACTCCAGGATTGGAAGCTGCTGAAAAATATATATCTTATCTGAGTGCTGATGCCACAACGGCCAACCTGGCAAATAATGGGTTGGTTGTGATACCCTCTTTAAGTGCTTTTGTAAATTTGAAAGTTCTCAATTTGGCTGGAAATGCTATCGTGAGGATAACTGCTGGTTCTCTTCCTCGAGGACTTCACGTTCTGAATTTATCAAAAAACAATATCTGCACTATAGAGGGATTACGTGAACTGACACGCCTTCGTGCCCTAGATCTCAGCTACAACCGAATAGTAAGAATTGGACATGGTCTTGCTTCATGTTCATCTCTGAAGGAGCTGCACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTACATCGCCTCTTGAAACTAAGTATCCTGGATCTTCGTTTTAATAAATTTTCAACTGCCAAATGTCTAGGCCAACTAGCAGCGAACTATAATTCGTTGCAAGCTATCAGCTTGGAAGGGAACCCTGCCCAGAAAAATGTTGGAGACGAGCAACTGAAGAAATATCTGCAAAGCCTCCTCCCCCGTCTTGTCTACTATAATCGACAGCCTATCAAAGCGAGCACTTGGAAAGATGATGCAGATCGTTCAGTTCTATTAGGCAAGAGTTCCTATCAGTTTGATCGTAGCCGTAGCCTTAACCTTAGATCTGATCGCAAGACCACCACAAGGAAGGGCAGTCGCCCATCGACTTCTTCCAGAAGCCAAAGGTTAGAGCCGCCAAAACTATCCAATGGCAGGCAAATCCAGCTGCCACCATCAACTGGAACAAGAGGATCAACCGAAAGTCGCAATCATTTTGATGTTCCCAGTAAAGGATCAAGGTCGACATCGAAGCTCTCTAATAGCAGTGAGGGAACCTTTCGATCTTTGTGA 2073 0.4216 MFRFSCFQAQLQNNKEKKIFQSSSEAMAKAMQDDLPKKVSNCSSSITRSSNLRPLKAQVHKQMNINGNHISNQDSVEHIYRSEDLDSKFSFESHVEVHQTRLLKKSHSLASGLHQKGSLYTDHINEYDADQDFSFNGSKSQNESSVSVCGQDHDIIPTDQCKKNPNPEVQVSSALAIDGSISPIGDPTSSLEISDTPLSAEFAGDSAEQTSGPSTPSLMESRSLPDFLDPALYSGAYAFKHPPSISRSSNDLHALGKRLKEVFINESDCQIRGDQERENDIGNIKESSHMDSYLNDGGDSYLISGSAKDRVMPTIDEMRDIETLRRVSSSDCFGEYPNKDFKIKRIEDWVISLEHCGPPPEIINELPESVDPVIDGNTKNGVTAAEVDHKVTPGLEAAEKYISYLSADATTANLANNGLVVIPSLSAFVNLKVLNLAGNAIVRITAGSLPRGLHVLNLSKNNICTIEGLRELTRLRALDLSYNRIVRIGHGLASCSSLKELHLAGNKISEVEGLHRLLKLSILDLRFNKFSTAKCLGQLAANYNSLQAISLEGNPAQKNVGDEQLKKYLQSLLPRLVYYNRQPIKASTWKDDADRSVLLGKSSYQFDRSRSLNLRSDRKTTTRKGSRPSTSSRSQRLEPPKLSNGRQIQLPPSTGTRGSTESRNHFDVPSKGSRSTSKLSNSSEGTFRSL 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0436 690 SUPERFAMILY Outer arm dynein light chain 1 413 585 - -
Lal2g0436 690 Pfam Leucine rich repeat 430 485 IPR001611 GO:0005515
Lal2g0436 690 Gene3D Ribonuclease Inhibitor 398 490 IPR032675 -
Lal2g0436 690 MobiDBLite consensus disorder prediction 135 151 - -
Lal2g0436 690 MobiDBLite consensus disorder prediction 135 166 - -
Lal2g0436 690 ProSiteProfiles Leucine-rich repeat profile. 452 473 IPR001611 GO:0005515
Lal2g0436 690 Gene3D Ribonuclease Inhibitor 491 588 IPR032675 -
Lal2g0436 690 MobiDBLite consensus disorder prediction 625 690 - -
Lal2g0436 690 SMART LRR_typ_2 472 495 IPR003591 -
Lal2g0436 690 SMART LRR_typ_2 428 451 IPR003591 -
Lal2g0436 690 SMART LRR_typ_2 517 539 IPR003591 -
Lal2g0436 690 MobiDBLite consensus disorder prediction 610 690 - -
Lal2g0436 690 ProSiteProfiles Leucine-rich repeat profile. 474 496 IPR001611 GO:0005515
Lal2g0436 690 ProSiteProfiles Leucine-rich repeat profile. 497 518 IPR001611 GO:0005515
Lal2g0436 690 PANTHER NISCHARIN RELATED 74 632 - -
Lal2g0436 690 PANTHER BNAA09G01440D PROTEIN 74 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0436 Lal-Chr2 2621252 2625788 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0436 - - lang:109355198 971.459