Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0401 ATGTCCAACCAAAACTCTCTCCCCCTCTATGAAAAATGTTGGCACAAGCACAATTTTAAAAGGGTAACGGATATGTTGATTTTGTTCCTCCTCATATTGCTTCTTTGTTATCGCATTATCTCTGTCAATGACTACTCTTTCCCTTGGTTCATTGCCTTGATATGTGAGTCATGGTTCACCTTCTCTTGGATTTTCATCTTCACATCCCAATGGACTCCTGCACTAGTCAAAACTTACCCAGGTCGTCTCTTACAAAGAGTGGAAGAGCTTCCAGCAGTGGATTTGTTTGTGACAACAGCAGACGTTGTACTTGAACCACCCATAATCACATTGAACACTGTTCTGTCTCTATTGGCACTTGACTACCCAACTAACAAGTTATCTTGTTATGTTTCTGATGATGCTTGTTCCCCTCTTACATTATATTCTCTTCTGGAATCCTCAAATTTTGCCAAACTTTGGATTCTATTTTGTAACAAGTACCATGTGCAAGTCAGAGCTCCATTCATGTACTTTTCTAACCACCCTGAGGCCTCTACATACAAAGACTCAATACCAGAGTTTAGACAAGAATGGTTAGAGATGAAAGAAATGTATGATCATCTTAGCCGCAAAATAGAAGAGGCCTCCCATAAATCAAATTCATGGCAACTTGATGGAGAATTCGCAGTTTTCTCAAACACTGAGCCCAAAAATCATCCAACCATTATACGGGTTATATGGGGGAATAAGGAACGGCTATTAGATGGGTTGCCACAGTTGATCTACATATCTAGAGAGAAGAGATCAAAGCACCCACATCATTTCAAAGCTGGTGCCATGAATGTGTTGACAAGAGTCTCTGGGTTGATGAGTAATGCACCATTCATGCTGAACGTAGATTGTGACATGTTTGTAAATAATCCAAAGATTGTTCAGCATGCAATGTGCATTTTGCTTGATTCCATTGGAGAAAAGGAGGTTGCATTTGCTCAATGCCCCCAACAATTCTATGGTGGACTGAAGGACGACCCTTTTGGAAATCAAATGATTATTTTGTTTAAGTACATTGGGACTGGAATAACAGGACTTCAAGGACCTTTCTACTCTGGAACAAACTGCTTCCATAGAAGAAAAGTTATTTATGGCCTTTCTCCACATAACATAGAAAAGGTTTATCTTATCTTAGTCCTTCTTGCTGATGTTGCAGGAAACAAGATATCAAAGAAGGAGTTGAAACAAAACTTTGGAGGTTCAGAGGAGCTAGTGGAATCAGTTGCCCTTGCTTTGGAAGGGAAAAGTTATATGCCTGATGATGATGATAGCAATGTTTCAAAGGCTCTTGATGCAGCAACTCAAGTTGCTAACTGTGGATATGAATATGCCACTGGCTGGGGACAACAGGTAGGTTGGATGTATGGATCAATAACAGAGGATGTCCAAACTGGTCTTACAATACATAGGAAAGGTTGGAGATCAGAAATGTGTACACCAAACCCAATTGGATTCACAGGTTGTGCTCCAAATTGTTTGCCCAATGCAATGACCCAACAAAAGAGATGGGCCACAGGAATGGTTGAGATTTTCTTTAGCAGACATTCTCCAATTTTTGCCACCCTTTTTGGTAAGCTCAGTTTCAGAATGTTCTTGGCTTATATGTGGATCATAGATTGGGGATTGTGCTCAATCTTTGAAACATGCTATGTCTCTCTCCTTGCTTATTGCATCATTACCAACTCCACTTTCTTTCCTCAGGGACTGGGTCTATGGATTCTTGTAACTCTTTTCACAATTCACATGGTGTATACTCTATCAGAGTACTTGGCAACCGGGCTATCAATCCAAGCGTGGTGGAACAATCAAAGAATGTCAAGAATAAAAATGGTGAGTGCTGGGTTTTTAGGATTTTTGAGTGCACTATTTAAGCTGCTTAGGTTGTCTGATACTGTGTTTGAGATAACAAGGAAAGATGAAAACTCTTATGGGAATGATGTACATGACTTAAATGTTGGAAGGTTTACATTCAATGAGTCACCAGTATTTGTAGCAGGCACTACCATTTTGTTTATGCAATTGGTAGCAATAGTTATCAAGGTGTTGGGGTTGCAACCAATTAAGAGTGTGGATAATGGGTGTGGACTAGGTGAAATATTGTGTAGTGTATATTTGATAATTTGCTATTGGCCTTTTTTAAGAGGGGTATGTGAAAGGGGAAAATATGGTATTCCCTTATCCACAATATGCAAGTCAGCAATTATGGTGTTTCTCTTTGTGTACCTATGTAGAAGCAGTGTTGTGGGATGA 2283 0.3968 MSNQNSLPLYEKCWHKHNFKRVTDMLILFLLILLLCYRIISVNDYSFPWFIALICESWFTFSWIFIFTSQWTPALVKTYPGRLLQRVEELPAVDLFVTTADVVLEPPIITLNTVLSLLALDYPTNKLSCYVSDDACSPLTLYSLLESSNFAKLWILFCNKYHVQVRAPFMYFSNHPEASTYKDSIPEFRQEWLEMKEMYDHLSRKIEEASHKSNSWQLDGEFAVFSNTEPKNHPTIIRVIWGNKERLLDGLPQLIYISREKRSKHPHHFKAGAMNVLTRVSGLMSNAPFMLNVDCDMFVNNPKIVQHAMCILLDSIGEKEVAFAQCPQQFYGGLKDDPFGNQMIILFKYIGTGITGLQGPFYSGTNCFHRRKVIYGLSPHNIEKVYLILVLLADVAGNKISKKELKQNFGGSEELVESVALALEGKSYMPDDDDSNVSKALDAATQVANCGYEYATGWGQQVGWMYGSITEDVQTGLTIHRKGWRSEMCTPNPIGFTGCAPNCLPNAMTQQKRWATGMVEIFFSRHSPIFATLFGKLSFRMFLAYMWIIDWGLCSIFETCYVSLLAYCIITNSTFFPQGLGLWILVTLFTIHMVYTLSEYLATGLSIQAWWNNQRMSRIKMVSAGFLGFLSALFKLLRLSDTVFEITRKDENSYGNDVHDLNVGRFTFNESPVFVAGTTILFMQLVAIVIKVLGLQPIKSVDNGCGLGEILCSVYLIICYWPFLRGVCERGKYGIPLSTICKSAIMVFLFVYLCRSSVVG 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0401 760 Pfam Cellulose synthase 399 732 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal2g0401 760 Pfam Cellulose synthase 93 385 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal2g0401 760 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 380 IPR029044 -
Lal2g0401 760 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 3 759 - -
Lal2g0401 760 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 566 IPR029044 -
Lal2g0401 760 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0401 Lal-Chr2 2409398 2413779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0401 8 751 Glycosyltransferase AT2G32530 43.874 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0401 - - gmx:100500469 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0401 2 2409398 2413779 Lal9g0366 9 2435439 2440343 LSH