Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0399 ATGAAAAAGAAGAAGAAAACCATAATTTCAAATTATATAAATGGAGGGAAACTACTCCATTCTCATTTTCCACTTTTAATTCCTCTAATTCCATTTCCAAATTTCTCACTTCCAAATCCCAATCTTCGTTCTCTACAACAAGAAACAGAGGTTCTTCTTCTTTCTTGTTCTTGGATGGCTGAAACCCTAAGCCCTAACGTGGGTACTCAGAAACAGAGGCTCCCCATTGCCGCTCGCATCCAATCCCCTACCTCCCCCTTTTTCTTGGGCTCCAATGACGACCAGCTCGAACGCACCCAGGCACGCGCTGCACGCGCCGCTGCCATCCGCCGCAAGAACGTTATTGCCTACAATTTGAATTCCCACTCTCATGATTCAGAATCCGATCCCTGTCTCAACAAGCAGCAGATTCTTGATTTGTTCCAAAATTGCATCAAGCTCGCCAGTGAAAATAAAATAAATCAGAAAAACACGTGGGAATTGAATTTGATTGACCACCTCACTGATATTATCAAGGTTGAAGAAGAAGGTGATACTGAGACTAATTTTCAAAAGGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATCTATTCGTTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAAAAGAGCAGGCCAAGAAGCTGAGGAAGACACTCATTTGGAGGGTGATAATGTTGTAAGTGGACAAGAAGAAAGCAGAAAAGAAACAAAGAAAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAGGTTCTTAATGTCAAGAAGTTTGATGCTGCATTTGCTGTGGACCCCCTCTATCGCCAGACAACAGCACAGTTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAACAATCTTGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACAAGAAGTTCCTGCAAAGTGCATGGCAAGTCAAAATCAACATGCTGTTTCAGATACAATTGATCTTTCTTTTATGAGAGGTGTGTTGCTCTTTGAAAAATCTGTGAAACTGTTGTTACATTTACAAATAGAAGCATTCAGTGTGGACTATGTTGACTTTCTTTTCCTTATAGATTGTGTTGAGCAGATGGTATCAGACATGTGCACAAAGAATGAAATTTCTCCAACTATCAGAACTATTGTCAATCAATTTGATGAAAGTAATCGGAGGCCTTCTGATTTTCAATTTCATAGCCATAATTCGGCTGAAGAGCTTGATACAGCTTTTGATTGTCAAATTGAAGCTGACAGAGAAGAATATGACAACTCCACAACCTGGAGTGATGATCATGATAACCAAACATTTGTTGCTGATCTGGGCTGTAATGATGCAGATCCAAGTTTTCCTAGTTACCCTCAGGAAAGTGAGACATTTCCTTCCCAAGACCCTGATATGGATGACAGATTTGAAAATGTTGATGGGTATTTAATCGTTAATCTGGGTTTTAATTCAAAACAAAATGCATGGGCAGGCCCTGACCATTGGAAGTATCGAAAATCTAAAGTCTCAGAGGTTCACCCTACTGCTGAAGATGGGCCAACCCTAAAATCTAAGCAGATGAGGAGTAAGAAACAGGCTGAAGTTGATTTAAATTTCACAAGTTCTCTTGAGAAAAAAATGTCAGATATATTTACTCCACCCAAGAATCCGAAATCAATACTGCTCCCTGAAAGTAGACTGCCTTGCAATACAAAACTTCCGGAGGACTGCCATTATCAGCCAGAGGATCTTATCAAGTTATTTCTTCTGCCTAATGTGAAGTGCCTTGGGAGGAGAGCAAAGAGGTTCTCAGATGGATCTAGAGAACAACCCAATGACTATGAGGCATTCCCTTCCTGTGATAATGGAAGTGCTTATGGTGGTGACCCTGGCGACTATGAAGGTGATGTTCATAGTGACATAGAGGACTCTGACACTCTTATTAGCCAGCCTCGTCAGGTCAATAAAATTGAAGTCCAGTACGACAAAACTTCCAAACAAGTTGATGTTCAGGCACTGAAAATCACTCTTTGGGACCATGTTCAAGAATCTGCTAAACTGTCTGTTCAGGGTGAACAAGAAATCTTATCTTTCAAGAATATGTTGGCCAATTTTCCTGGCGAGTGTAATGCTGCTGCAACTATTAGTGACATCTCTCCTCATTTATGCTTCATATGTCTATTGCATTTGGCAAATGAGAAAGGATTGAGCATTCAAAGCTGCTCCAACTTGGATGATCTTGACATACACCTTCCACAGGTTGATGATGCTTTAAGTGGAACAGTTTAG 2292 0.4092 MKKKKKTIISNYINGGKLLHSHFPLLIPLIPFPNFSLPNPNLRSLQQETEVLLLSCSWMAETLSPNVGTQKQRLPIAARIQSPTSPFFLGSNDDQLERTQARAARAAAIRRKNVIAYNLNSHSHDSESDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKVEEEGDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMKRAGQEAEEDTHLEGDNVVSGQEESRKETKKKLSPLSTLESSFEVLNVKKFDAAFAVDPLYRQTTAQFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMASQNQHAVSDTIDLSFMRGVLLFEKSVKLLLHLQIEAFSVDYVDFLFLIDCVEQMVSDMCTKNEISPTIRTIVNQFDESNRRPSDFQFHSHNSAEELDTAFDCQIEADREEYDNSTTWSDDHDNQTFVADLGCNDADPSFPSYPQESETFPSQDPDMDDRFENVDGYLIVNLGFNSKQNAWAGPDHWKYRKSKVSEVHPTAEDGPTLKSKQMRSKKQAEVDLNFTSSLEKKMSDIFTPPKNPKSILLPESRLPCNTKLPEDCHYQPEDLIKLFLLPNVKCLGRRAKRFSDGSREQPNDYEAFPSCDNGSAYGGDPGDYEGDVHSDIEDSDTLISQPRQVNKIEVQYDKTSKQVDVQALKITLWDHVQESAKLSVQGEQEILSFKNMLANFPGECNAAATISDISPHLCFICLLHLANEKGLSIQSCSNLDDLDIHLPQVDDALSGTV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0399 763 PANTHER CONDENSIN COMPLEX SUBUNIT 2 350 757 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 PANTHER CONDENSIN COMPLEX SUBUNIT 2 59 336 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 Pfam Condensin complex subunit 2 85 605 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 Pfam Condensin complex subunit 2 641 751 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 PANTHER CONDENSIN COMPLEX SUBUNIT 2 59 336 - -
Lal2g0399 763 PANTHER CONDENSIN COMPLEX SUBUNIT 2 350 757 - -
Lal2g0399 763 PIRSF Condensin_H 60 636 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 PIRSF Condensin_H 630 754 IPR022816 GO:0000796|GO:0007076
Lal2g0399 763 MobiDBLite consensus disorder prediction 511 532 - -
Lal2g0399 763 MobiDBLite consensus disorder prediction 604 632 - -
Lal2g0399 763 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0399 Lal-Chr2 2400323 2405538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0399 K06676 - gmx:100799781 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0399 2 2400323 2405538 Lal9g0365 9 2428703 2434032 LSH