Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0344 ATGCCTAGGGTTTCAGAAAACAGAGATGGATCTGAAACAGAAACCTCAGTACCCAAAATCTTAACCACAATCATTGGGTTCTTTCCTTATTTAACACCACCCACCACCAATTCCTCCCTCAAGAACATTTTCCCAATGAAACGCACCGTTCCATCCTTATTTTGGCTTCTCCTCCTGGCTGTGTTCATTACCACTGCTACCTATTGCGCCGTGGTTAGCAGAGGCTTAATCTCTATTGATCTCAAATCCAAAGTCCTGATCCAAGATCCAGAACTGTTGTTAAATGCCACACTGCTGAAACACGCGGCAATTGAAATTGGAGAAGAGAAAACGAAGCAGGAGATACAGAATCTTCTAGATGGAAACTTCGGTAGCCAAGCACGCCATAGAACATTTGTCTCGTGGCGGAGATTCATCCACCACAATGTTGACAAATCCTCAAGGAATGTGAACCTTCGAGCAACACTGCGTTCGCCACTGTTTTATCGGTACTGGATGGATTTTAGGAAGGTTCTGAATGAGTGGGCTAGGAAGAAGAGGTTCCAACCTGGGATAATGTTGGATTTGACTCGATTGGTGAAGGTTCCGGTCGATAAGCACAACGGACTTTTTGATACTGGTGAACGGAGATATGCTTCATGTGCTGTTGTTGGGAACAGCGGGATTTTGCTGAACAAGGATTATGGGGGTTTGATTGATGCACATGATGCTGTTATAAGGTTGAACAATGCAAGGGTTGATAACTTTGAACACAAGGTTGGGAAGAAAACTAGCATTTCATTTGTGAACAGCAACATTTTGCATCTATGTGCAAGAAGGGAAGGGTGTTTTTGCCATCCTTATGGTGCCAATGTCCCAATTGTTATGTATATTTGTCAAGCAGTGCATTTCTTGGATTACACTGTGTGCAATTCATCACACAAGGCACCCCTTTTGGTAACTGATCCTAGGTTTGATGTGTTATGTGCTAGGATTGTGAAGTACTACTCTTTGAAGAGGTTTGTGGAGGAATCAGGGAAAGGTTTGGAGGAATGGGGTAATGCTCATGATGGGGCTTTCTTCCATTATTCTTCTGGAATGCAGGCTGTGATGCTGGCTTTGGGAATATGTGATAAAGTTAGTATCTTTGGGTTTGGGAAATCAACTTCTGCTAGACATCATTATCATACTAACCAGAAATCTGAGCTTCATTTGCATGATTATGAGGCAGAATATGCATTTTACCATGACCTTGTTGATGGACATAAGCCTATCCCATTTCTGTTGGACACATTTAAGGTTCCTCCTGTTGTTTTGTATCAATGA 1305 0.4245 MPRVSENRDGSETETSVPKILTTIIGFFPYLTPPTTNSSLKNIFPMKRTVPSLFWLLLLAVFITTATYCAVVSRGLISIDLKSKVLIQDPELLLNATLLKHAAIEIGEEKTKQEIQNLLDGNFGSQARHRTFVSWRRFIHHNVDKSSRNVNLRATLRSPLFYRYWMDFRKVLNEWARKKRFQPGIMLDLTRLVKVPVDKHNGLFDTGERRYASCAVVGNSGILLNKDYGGLIDAHDAVIRLNNARVDNFEHKVGKKTSISFVNSNILHLCARREGCFCHPYGANVPIVMYICQAVHFLDYTVCNSSHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEEWGNAHDGAFFHYSSGMQAVMLALGICDKVSIFGFGKSTSARHHYHTNQKSELHLHDYEAEYAFYHDLVDGHKPIPFLLDTFKVPPVVLYQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0344 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 46 434 - -
Lal2g0344 434 Pfam Glycosyltransferase family 29 (sialyltransferase) 191 413 IPR001675 GO:0006486|GO:0008373
Lal2g0344 434 Gene3D Glycosyl transferase family 29 107 417 IPR038578 -
Lal2g0344 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 46 434 - -
Lal2g0344 434 PIRSF Sialyl_trans 45 286 IPR012163 GO:0006486|GO:0008373
Lal2g0344 434 PIRSF Sialyl_trans 326 417 IPR012163 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0344 Lal-Chr2 2073080 2074384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0344 209 378 Glycosyltransferase AT3G48820 24.706 2.43e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0344 K00786 - gmx:100789506 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0344 2 2073080 2074384 Lal2g0344 2 2073080 2074384 ECH