Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal2g0280 | ATGAAACAAGCAGCTTTCTTCTCCTTCTCACTCTTCCTACTGTTTTCCTCTACCACCTTGGCCATTTCACCTGCACCTGCCCCAAAAGCACCAGCAAAAACTCCCTCTACCCCGAGTGCTGCAGCACTGTCGCCGAAACCATTAGTGCCTACCTTACCTCAATCACCAGACTCCTCAGATTCTGTCCCTGATGACATCACCAGAATCCTCAAGAAGGCCAAAATATTCTCAGTACTAATCCGATTGCTGAAAACCACAGAAATTATGAACAACATTAACTCACAGCTCATAACAGCCAAGAGTGGAGGCTTAACAATCCTTGCACCAGATGATGCTGCCTTCTCAAACCTCAAAGCAGGTTTCCTCAACTCCCTCAACGAAGGCCAAAAGATCGAACTATTGCAGTTCCACATTCTACCTGAATATGTTTCAAGCTCAAACTTTGATTCCCTGAGTAACCCTGTGCAGACAGTGGCAGGTAAAGACCCTGCAAGGTTGCCATTGAATGTGAATGCTTTGGGTAACAGTGTGAACATTTCAACTGGGGTAGTCAATGCCTCCATTGTAGGGGTAGTTTACTCGGATAACAAGCTTGCCATTTATCGATTGGATAAGGTGCTTCTTCCTCTGGATTTCTTTGCAACCAAGGCTCCAGCTTTGGCTCCAACTAGTGCCAAGGCTCCTAAAGCTGCTAAGGATAATTCAGCTGCACAAGGTGAAGATGACACAACTCAGGATCAGGATAATAAGTCTGCAGCAGTGAGTTCGGTTTGCATTCGTGGAACAACAATGGTGATGCTTGGAATAGCTTTAGTTTATGTGGCAATGATGTAG | 834 | 0.4544 | MKQAAFFSFSLFLLFSSTTLAISPAPAPKAPAKTPSTPSAAALSPKPLVPTLPQSPDSSDSVPDDITRILKKAKIFSVLIRLLKTTEIMNNINSQLITAKSGGLTILAPDDAAFSNLKAGFLNSLNEGQKIELLQFHILPEYVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNASIVGVVYSDNKLAIYRLDKVLLPLDFFATKAPALAPTSAKAPKAAKDNSAAQGEDDTTQDQDNKSAAVSSVCIRGTTMVMLGIALVYVAMM | 277 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal2g0280 | 277 | SUPERFAMILY | FAS1 domain | 56 | 210 | IPR036378 | - | |
| Lal2g0280 | 277 | Gene3D | FAS1 domain | 50 | 209 | IPR036378 | - | |
| Lal2g0280 | 277 | MobiDBLite | consensus disorder prediction | 237 | 252 | - | - | |
| Lal2g0280 | 277 | MobiDBLite | consensus disorder prediction | 26 | 63 | - | - | |
| Lal2g0280 | 277 | Pfam | Fasciclin domain | 76 | 209 | IPR000782 | - | |
| Lal2g0280 | 277 | PANTHER | FASCICLIN DOMAIN PROTEIN | 4 | 277 | - | - | |
| Lal2g0280 | 277 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 4 | 277 | IPR045003 | - | |
| Lal2g0280 | 277 | SMART | fasc_3 | 105 | 210 | IPR000782 | - | |
| Lal2g0280 | 277 | MobiDBLite | consensus disorder prediction | 224 | 252 | - | - | |
| Lal2g0280 | 277 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 63 | 207 | IPR000782 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal2g0280 | Lal-Chr2 | 1645844 | 1646677 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal2g0280 | - | - | gmx:102665444 | 354.369 |