Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0254 ATGGCGCAGCCACAATCTGTGCCAGGGTCGGGGAGCATCCCTAAGAAAAAAATGACCAAACAATTGACAGGAAAAAGGGATGATACACCTTTACACTCTGCAGCAAGAGCAGGAAATTTGGATGTAATTAAGGACACACTTTCTGGTACTGATGAGGGTGAAGTGCGTGAATTATTGGCAAAGCAGAATCAAGCGGGAGAAACAGCACTTTATGTTGCTGCTGAATATGGTCATGTTGATATAGTTAGGGAGTTGATTCAATATTATGATCTTGCTGATGCTGGAATTAAGGCAAGGAATGGTTTTGATGCACTCCACATTTCTGCTAAACAAGGTCATTTAGGGTATTCACTATTTTCCATTTATGTCTCCCGGATTGTAGATGTACTAAAGATCCTTATAGAGGATCATCCTGAATTGTCAATGACTGTGGATCCATCCAACAGCACGGCTTTGCACACCGCTGCAACACAAGGGCATATTGAGATAGTCAAATTTCTATTAGAAAAAGGAAGCAGCCTTGCAACCATTGCTAGAAGTAATGGGAAAACCACTTTGCATTCTGCTGCGAGAAATGGACATTTGGAGGTTGTGAAAGTAATTCTGGAGAAGGAGCCTGGGGTTACGACACGGACTGATAAGAAGGGCCAGACAGCACTTCACATGGCAGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGTTGATAAAAGCAGATCCTTCTACAATAAACATGGTTGATAATAAGGGTAACACAGCATTACATATAGCAACAAGGAAGGGCAGATCTCAGATTATTAAACTGCTTCTTGGACAGAGTGAAACAGATAACAAACTGGTTAATAGGTCCGGCGAAACTGCGTTAGACACTGCTGAGAAAAATGGGAACTCTAATGTTAAAGCAATTCTGCTGGAGCATGGTGTTCAAAGTGCAAAAGCCATAAAGCCTCAGGCAACAACAACTACAGCCCGTGAATTGAAACAAACTGTTAGTGACATAAAGCATGAAGTCCATTACCAGTTAGAACACACCCGCCAAACTAGAAAACGCGTTCAAGGAATTGCCAAACGTCTCAACAAAATGCATGCAGAAGGACTTAACAATGCAATCAACTCCACAACTGTGGTTGCCGTCCTCATAGCCACTGTTGCATTTGCAGCTATTTTCACAGTTCCGGGACAATTTGTTGATGATCCTGAAGATATTCCTCCGGGAATGTCCCTTGGTGAAGCAAATATAGCTCAAAATGTTCCATTTCTCATTTTCTTTGTATTTGATTCCATTGCCCTCTTCATTTCTTTGGCGGTCGTGGTGGTGCAAACTTCGGTTGTGGTTATCGAAAGTAAAGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTAATGTGGTTGGCTTGTGTACTTATATCAGTGGCCTTCTTGGCATTGTCATTTGTTGTGGTGGGGAAGGATGAGAAGTGGTTGGCAATTGTAGTAACCATTATAGGCACAACTATAATGGCTACAACATTAGGCATCATGTGTTATTGGGTAATTAGGCACCACATTGAAGCCTCAAATTTGAGGAGCATTCGGAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTGTCGGCGCCAATGTCAGATTCTGAGATACTAAACAATGAATTTAATAAAATGTATGCAATTTAG 1677 0.4192 MAQPQSVPGSGSIPKKKMTKQLTGKRDDTPLHSAARAGNLDVIKDTLSGTDEGEVRELLAKQNQAGETALYVAAEYGHVDIVRELIQYYDLADAGIKARNGFDALHISAKQGHLGYSLFSIYVSRIVDVLKILIEDHPELSMTVDPSNSTALHTAATQGHIEIVKFLLEKGSSLATIARSNGKTTLHSAARNGHLEVVKVILEKEPGVTTRTDKKGQTALHMAVKGQSLEVVEELIKADPSTINMVDNKGNTALHIATRKGRSQIIKLLLGQSETDNKLVNRSGETALDTAEKNGNSNVKAILLEHGVQSAKAIKPQATTTTARELKQTVSDIKHEVHYQLEHTRQTRKRVQGIAKRLNKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPEDIPPGMSLGEANIAQNVPFLIFFVFDSIALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKDEKWLAIVVTIIGTTIMATTLGIMCYWVIRHHIEASNLRSIRKSSMGSRSRSFSVSAPMSDSEILNNEFNKMYAI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0254 558 Pfam Domain of unknown function 364 480 IPR026961 -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat region circular profile. 181 204 - -
Lal2g0254 558 PANTHER ANKYRIN REPEAT PLANT PROTEIN 8 558 - -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat region circular profile. 215 237 - -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat profile. 147 179 IPR002110 GO:0005515
Lal2g0254 558 ProSiteProfiles Ankyrin repeat region circular profile. 147 174 - -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat region circular profile. 249 270 - -
Lal2g0254 558 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 8 558 - -
Lal2g0254 558 Gene3D - 12 117 IPR036770 -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat profile. 215 237 IPR002110 GO:0005515
Lal2g0254 558 ProSiteProfiles Ankyrin repeat profile. 65 87 IPR002110 GO:0005515
Lal2g0254 558 Pfam Ankyrin repeats (3 copies) 31 114 IPR002110 GO:0005515
Lal2g0254 558 Pfam Ankyrin repeats (3 copies) 128 207 IPR002110 GO:0005515
Lal2g0254 558 Pfam Ankyrin repeats (3 copies) 213 273 IPR002110 GO:0005515
Lal2g0254 558 ProSiteProfiles Ankyrin repeat profile. 249 270 IPR002110 GO:0005515
Lal2g0254 558 ProSiteProfiles Ankyrin repeat region circular profile. 65 87 - -
Lal2g0254 558 ProSiteProfiles Ankyrin repeat profile. 181 213 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 181 210 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 100 142 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 147 176 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 26 57 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 215 245 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 283 313 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 249 278 IPR002110 GO:0005515
Lal2g0254 558 SMART ANK_2a 65 94 IPR002110 GO:0005515
Lal2g0254 558 MobiDBLite consensus disorder prediction 1 32 - -
Lal2g0254 558 Gene3D - 118 329 IPR036770 -
Lal2g0254 558 SUPERFAMILY Ankyrin repeat 30 308 IPR036770 -
Lal2g0254 558 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Lal2g0254 558 PRINTS Ankyrin repeat signature 163 177 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0254 Lal-Chr2 1488610 1498598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0254 3 558 Miscellaneous Gene Families AT1G07710 72.302 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0254 - - gmx:100779230 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0254 2 1488610 1498598 Lal2g0254 2 1488610 1498598 ECH