Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0245 ATGTCGGTCACTTCAAGTTCCAGGGGGAAATCAACGGAACTTCAAATCCCAAAGAAATTGACAGACAGAGAAACAAGTCCAGATAGAAACAAAGTTTGGACCGAACCAAAACCCAAAACGCCAAGGAAAGTCTCCGTCGTTTACTACCTCTCCCGAAATGGCCAGCTTGAGCACCCTCATTTCATGGAACTCATTCTCTCTTCACCTCAAGGACTCTACCTCAAAGATGTAATCAATCGCTTAAACCTGCTCCGAGGGAAAGGCATGGCTTCCATGTACTCCTGGTCTTCAAAACGGAGTTATAAAAACGGCTTCGTTTGGCATGATTTGTCGGAGGATGATTTCATTTACCCAACGCAAGGACAAGACTACATTCTCAAAGGATCTGAGATTGTCGATCACAACAAATCGGAGGATAACTCTGATTCCCCACCGGCGATCCCCACACGGCGGCGCAACCAGTCCTGGGGCTCCATGGACTCGAACGAGTACCGAGTTTACTATAAGTCTGAATCTTTCGGTGACTCGTCTGGGAAAATCGCCGCCAATGCTTCAACTCAGACGGACGATAAGCGACGGAGGAGGAGGGCGGTGAGAGAAGAGGAAGAAGAACAAAAACACGGAATCGAAGATGAAGAGCTTGAAATTGAAGGAGAGCGGGTCCCACATGCGTGTCTGAATCAAAGTACGGAACTGAGTAGGGATGAGATCTCGCCTCCACCGTCCGATTCGAGCCCCGAAACTCTCGAAACGCTAATGAAGGTAGATGGACGGCTAGGATTGCGTGAAACGATTGGTGCTAAGGAGAATAATCTAACGGCGGAGATCTGTCCAAGTGGGAAAATGAAAGCCTCTTCGGTTCTTCTGCAGTTGTTATCGTGCGGTGCCGTGTCTTTCAAAGAGAGTGGAGCCAATAAAGATCAAGGGTTCTCGTTGGTTGGACACTACAAGAATAGATTGCCACGTGGAGCACGGAATCAAAAGGAGGCGGGGACATCAATGGAAATTCCTGATTTGAACAGGGTTGTATTGGAAGATAAGGAGTATTTCAGTGGGAGCGTCATCGAAACCAAAAAAATTGAAGTCCCTGCATTGAAGAGGTCTTCTTCTTACAATGCTGATAGCGGTTCCCGGTTGCAAATTATTGAGCATGATGATGTTGTGAGGGCAAAGTGCATACCAAGGATATCCAAGGCACTACCGTCAAAGAAAGAAGAGAGTGCTTCCATGCATAGTGTAAGCAGCAGCCAACATGGAAGCAAAAGATTTGATTTACCACAATAA 1284 0.4696 MSVTSSSRGKSTELQIPKKLTDRETSPDRNKVWTEPKPKTPRKVSVVYYLSRNGQLEHPHFMELILSSPQGLYLKDVINRLNLLRGKGMASMYSWSSKRSYKNGFVWHDLSEDDFIYPTQGQDYILKGSEIVDHNKSEDNSDSPPAIPTRRRNQSWGSMDSNEYRVYYKSESFGDSSGKIAANASTQTDDKRRRRRAVREEEEEQKHGIEDEELEIEGERVPHACLNQSTELSRDEISPPPSDSSPETLETLMKVDGRLGLRETIGAKENNLTAEICPSGKMKASSVLLQLLSCGAVSFKESGANKDQGFSLVGHYKNRLPRGARNQKEAGTSMEIPDLNRVVLEDKEYFSGSVIETKKIEVPALKRSSSYNADSGSRLQIIEHDDVVRAKCIPRISKALPSKKEESASMHSVSSSQHGSKRFDLPQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0245 427 MobiDBLite consensus disorder prediction 15 38 - -
Lal2g0245 427 PIRSF UCP031043 12 417 IPR021182 -
Lal2g0245 427 MobiDBLite consensus disorder prediction 186 220 - -
Lal2g0245 427 MobiDBLite consensus disorder prediction 230 249 - -
Lal2g0245 427 MobiDBLite consensus disorder prediction 177 221 - -
Lal2g0245 427 Coils Coil 199 219 - -
Lal2g0245 427 MobiDBLite consensus disorder prediction 1 38 - -
Lal2g0245 427 Pfam Protein SOSEKI, plant 142 375 IPR010369 -
Lal2g0245 427 Pfam Protein SOSEKI, plant 44 140 IPR010369 -
Lal2g0245 427 MobiDBLite consensus disorder prediction 132 156 - -
Lal2g0245 427 MobiDBLite consensus disorder prediction 141 156 - -
Lal2g0245 427 PANTHER OS01G0839200 PROTEIN 11 396 - -
Lal2g0245 427 MobiDBLite consensus disorder prediction 407 427 - -
Lal2g0245 427 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 396 IPR010369 -
Lal2g0245 427 MobiDBLite consensus disorder prediction 399 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0245 Lal-Chr2 1431678 1436601 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0245 - - gmx:100803283 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0245 2 1431678 1436601 Lal2g0245 2 1431678 1436601 ECH