Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0184 ATGACATTCAACGTTTATTTTGTTGTTAGCCTCCTTTCTCTACTTAGTTCATCATCCATTGTTTTGACACAAGGTAATGAAATTACTCCTGAGGTACCTTTACTCAATCGGAACACTTTCCCTAATGGCTTCATCTTTGGTACAGCATCCTCAGCCTACCAGTACGAAGGTGCAGCAAGTGAAGGTGGTAGAGGACCAAGTATATGGGATACCTTCACTCATAAATATCCAGAGAAGGTGAAGGACGGACAAAATGGAGATGTAGCCGTTGATTCATATCACCGCTACAAGGAAGATGTTGCCATCATGAAGGATATGAATTTGGATGCTTACAGATTCTCCATTTCTTGGTCTAGAATACTCCCAAAAGGAAAGCTTAGTGGAGGTATAAATCAAGAAGGAATCGACTACTACAACAACCTCATCAATGAGCTAATTGCAAATGGTTTACAACCACTTGTGACCATTTTCCATTGGGATCTTCCACAAGCCTTAGAAGATGAGTACGGTGGCTTCTTAAGCCCACTCATTGTAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAGGAATTTGGAGATAGGGTAAAGAATTGGATAACGTTGAATGAACCATGGAGTTTCAGCCAAAATGGATACGCAATGGGGCATATGGCACCAGGTCGATGTTCTGGTTGGTTGAATCATACTTGTGTTGGTGGTAATTCTGCAATTGAGCCATATTTGGTTACACACCATCAACTTCTTGCTCATGCAGCAGCTGTCCAAGTTTATAAGACCAAATATCAGGAATCTCAGAATGGTTTAATAGGCATAACCTTGATTGTTACTTGGTCCGTGCCAATCTCAGATAACAAATTCGATCAAAAAGCTGCTGAACGATCTATTGACTTCATGTATGGATGGTTTATGGATCCTCTAACAAGAGGAGAATATCCACAAAGCATGCGATCCTTGGTTAGAACAAGGTTACCAAAGTTCACTAAAGCACAATCCATGCAACTGATTGGTTCATATGATTTTATTGGCCTAAACTATTACTCTGCTGGTTATGTCACTGATGCCCCTCTCCTAAGCAATGCAAGACCCACCTACCAAACTGATTCTCTTGTTGACATGTCATTCATGCGTGATGGAAAACCCATTGGTGTAAATGTTGCTTCAAACTGGTTGTATGTTTACCCAAGAGGACTTAGAGATCTATTATTATACACAAAAGAAAAGTATAATAATCCTTTAATTTATATTACCGAAAATGGTATAAATGAATATGATGATCCACAACTAACATTGGAGGAAGCTCTTTTGGATACTTATAGAGTTGACTATTATTACCGTCATCTTTATTATCTTAAATCTGCAATTGAGGCTGGTGTAAATGTAAAAGCATATTTTGCATGGTCTTTGTTAGACAATTTCGAATGGCATTCGGGCTATACAGTGAGATTTGGAATGAATTTCATAGATTACAAAAATGGTCTGAAAAGATATCCAAAGATCTCTGCACTATGGTTCAAGGAGTTTCTCACACCAGAAGCTAGAGATTACGGTGTTGCCACTGAATAA 1566 0.3876 MTFNVYFVVSLLSLLSSSSIVLTQGNEITPEVPLLNRNTFPNGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHKYPEKVKDGQNGDVAVDSYHRYKEDVAIMKDMNLDAYRFSISWSRILPKGKLSGGINQEGIDYYNNLINELIANGLQPLVTIFHWDLPQALEDEYGGFLSPLIVKDFQDYAELCFKEFGDRVKNWITLNEPWSFSQNGYAMGHMAPGRCSGWLNHTCVGGNSAIEPYLVTHHQLLAHAAAVQVYKTKYQESQNGLIGITLIVTWSVPISDNKFDQKAAERSIDFMYGWFMDPLTRGEYPQSMRSLVRTRLPKFTKAQSMQLIGSYDFIGLNYYSAGYVTDAPLLSNARPTYQTDSLVDMSFMRDGKPIGVNVASNWLYVYPRGLRDLLLYTKEKYNNPLIYITENGINEYDDPQLTLEEALLDTYRVDYYYRHLYYLKSAIEAGVNVKAYFAWSLLDNFEWHSGYTVRFGMNFIDYKNGLKRYPKISALWFKEFLTPEARDYGVATE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0184 521 SUPERFAMILY (Trans)glycosidases 32 509 IPR017853 -
Lal2g0184 521 Pfam Glycosyl hydrolase family 1 37 510 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 Gene3D Glycosidases 28 510 - -
Lal2g0184 521 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 3 513 - -
Lal2g0184 521 PANTHER GLYCOSYL HYDROLASE 3 513 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 ProSitePatterns Glycosyl hydrolases family 1 active site. 414 422 IPR018120 -
Lal2g0184 521 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 44 58 IPR033132 -
Lal2g0184 521 PRINTS Glycosyl hydrolase family 1 signature 338 352 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 PRINTS Glycosyl hydrolase family 1 signature 414 422 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 PRINTS Glycosyl hydrolase family 1 signature 437 448 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 PRINTS Glycosyl hydrolase family 1 signature 458 475 IPR001360 GO:0004553|GO:0005975
Lal2g0184 521 PRINTS Glycosyl hydrolase family 1 signature 482 494 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0184 Lal-Chr2 1086872 1090578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0184 6 515 Glycoside Hydrolase AT5G44640 53.620 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0184 - K01188 gmx:100792870 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0184 2 1086872 1090578 Lal2g0184 2 1086872 1090578 ECH