Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0176 ATGGCAACTACGTTGTTACGCAGCATTCGAAGAGTTTCCTCTGTTCTCACATTCTCGTATCCTAAAACCTCGTTTTCGGTCTCTACGAGATCAGTTGTGAGGTCCCAAATTCCGATTTGGTTTTCGACCAGGCATTGTGTCCCGCTTGAAAGGTTAGGTTTTTGGTGTGGTAGTAGAAACTTGAGTTATGGAACTGTTAATCTTGTGATAGAGGGAGGGAAGACCAAGTTTGAGACCAAGGAGGTTGAGCCTCCAAAGAAAGACAAATGGAAAACAAAGAAGAGGTTTAAAATGCAGAAGAAGAGAGAGAAGGAGAAGAGGAAAGCTGCAAATAGGAGAGACCCTCGTCATCTTGGTGTTAAAAGGAAGAAGAAGCAGAAGTTTGCCAGTCCGGAAGAGAGAATCAAGTGCAAGCTTGAGAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGACTCAAACGATATGAAGTTCCTAAACTTCAGGGTCCTGTTGTAAAACCTGATGGTTTGACAGGGGAGGAACGACATTATTTGAAGAAAATGACTCAGAAGAGTTCTAATTATCTACAAGTTGGAAGAAGAGGATTATTTGGAGGGGTTATTCTTAATATGCACATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGCCAAGTACATGAGTATGCACAAGAACTTGCTAGGTTGAGTGGTGGTATTCCAATTCACATATTTGGAAATGACACAATAATATTCTATCGCGGAAAGAACTACATACAGCCTGATCTTATGTCACCAATTGATACATTATCAAAGAAAAAGGCACTTGAAAAATCAAAGTATGAGCAATCACTTGAGTCAGTGAGGCGTTTCATTGCTATTGCTGAGAAAGAGTTAGAACTGTATTACAGACACATTGCACTTTATGGTGATCCAAACAACAGAAATCCATTATCAATGCTGGATGGTCCAAGTCTAAACACCAGTGGAAAAGGGAATCATGGAATTCATAACGAAAAAAGCGTTGATTCAAATAGCGATTATTTTTCAGTCAACCTCTCGGGGGCAGAAGCTGATTCCACAGAGATGGAGCTATCAGAAACTGAAGATGAAAACTTGTCAATGAATGAATCAGATTCCGAAGAGGACAGCATATTGGATGATCAAGAAAGGAAGGTTTGTTTTACTACAATGCATGATGAAACTGCAAGATCAGCCACTGGTTCATCATCAATGCCTAAACAAAAATACCCATATAATAATAAACATATATTATCTGAACAAATGCCAATAACTAGTGAGTAG 1308 0.3937 MATTLLRSIRRVSSVLTFSYPKTSFSVSTRSVVRSQIPIWFSTRHCVPLERLGFWCGSRNLSYGTVNLVIEGGKTKFETKEVEPPKKDKWKTKKRFKMQKKREKEKRKAANRRDPRHLGVKRKKKQKFASPEERIKCKLEKARIKEALLIERLKRYEVPKLQGPVVKPDGLTGEERHYLKKMTQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIHIFGNDTIIFYRGKNYIQPDLMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPNNRNPLSMLDGPSLNTSGKGNHGIHNEKSVDSNSDYFSVNLSGAEADSTEMELSETEDENLSMNESDSEEDSILDDQERKVCFTTMHDETARSATGSSSMPKQKYPYNNKHILSEQMPITSE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0176 435 Coils Coil 93 113 - -
Lal2g0176 435 MobiDBLite consensus disorder prediction 363 385 - -
Lal2g0176 435 SUPERFAMILY YhbY-like 171 264 IPR035920 -
Lal2g0176 435 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 IPR040286 -
Lal2g0176 435 MobiDBLite consensus disorder prediction 343 362 - -
Lal2g0176 435 Gene3D - 171 267 IPR035920 -
Lal2g0176 435 MobiDBLite consensus disorder prediction 401 435 - -
Lal2g0176 435 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Lal2g0176 435 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 - -
Lal2g0176 435 MobiDBLite consensus disorder prediction 320 435 - -
Lal2g0176 435 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Lal2g0176 435 MobiDBLite consensus disorder prediction 80 129 - -
Lal2g0176 435 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Lal2g0176 435 MobiDBLite consensus disorder prediction 90 124 - -
Lal2g0176 435 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0176 Lal-Chr2 1047072 1051356 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0176 - - gmx:100796393 558.525