Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0159 ATGGCGATTCAACACATTAAACGCTTCCAAATCGAATCCCAATCTGTAAAACCCTTTTCCCCTCTCTTCTTCTTTTATTCTTCTTTTTCTTCTAATACTTCAAACAATGACACCAAAACACAAACTCTGGTTTCCGTTTTGACCCATCAACGTTCCAAATCTCGTTGGAACGCCCTCCGTTATCTCTGCCCCAACGGCATTGACCCAACCCAATTCTCCCAAATCACAATACAACTGAAGAACAATCCTCACCTCGCACTCCGTTTCTTCAATTGGACCCAATCCAATTCCATTTGCCACCACACCCTCTCTTCATACTCCACCATTATTCATCTCTTTGCACGTGCTCGCCTCTACAAACATGCCTACCACACCATCCGAACCGCTATTCGCACTTCACAATACGACGACGAACACTGCCGTTTCGATTCTCCGCCTTTAAACCTCTTTGAGACACTCGTCAAGACCTACCAAGGTTGTGGCTCTTCTCCTTTCGTCTTTGATTTGCTTATCAAAGCTTGTTTGGAATCTAAAAAACTCGACCCTTCAATTGAAATCGTTAGGATGTTACTCTCCCGCGGGATCTCCCCTAAAGTTACCACCTTGAATTCTTTGATTTTTAGGGTTTGTAAAAGTCGAGGTTTTGATGCAGGCTATGCAATTTACCGAGAGATTTTTCGGTTAGATGACCCAAAATACGAAATTTCGAAGAGGGGTTCTGGTTTTAAAGTTAACCCTAATGTGCACACTTATAACGAGTTAATGCTGTGCTGTTATCAAGATGCTTTGTTTGAGAAGGTTGGAGAAATTTGGAATGAAATGGAGTGTGCTCCAAATACTTACAGCTATACTTTGAGGATGGCTTCTTTGTGCGATGAAGGGAGGGTTGAAGATGCTGAGAAATTATGGGAAGAAATGAGGAATAAGAGAATAGAGCCTGATGTAATTAGTTACAATACTATGATGGGTGGGTTTTGTAATATTGGAGATGTTGGAAGGGCTGAAGAGTTTTATAGAGAAATGACATCAGGTGGTATTGAAAGCACTGCTTCAACTTATGATCACCTTGTGAAGGGATATTGTAATATTGGGGATGTTGATTCTGCTGTTCTTGTTTATAAGGATATGTATAGGAAGGATTTCTGCCCTGTTCCTTCAACTATTGATGTGGTGACTAGGTTACTATGTGACAAAGGTAGGGTTAAGGAAGCTCTACAGCTAGTGAGAAATGCCACTGGTAAGTTTGGTTTGGTTCCAAAGGGAAACAGTTATGAGACCTTGATAAAGGGACTGTGTGCCGAGGGGAGAATGGAGGAAGCATTCAAGATTCAGGCTGAGATGGTAGGAAAAGGGTTTCATCCCAATTCCAAAATATATGCCGCTTTTATTGATGGGCATGTTAGACAAGGCAATGAGGAACTTGCAGGAGCTTTGAGGAAAGAAATGCTGCAAACTCAGATTCAGAGCTAA 1470 0.417 MAIQHIKRFQIESQSVKPFSPLFFFYSSFSSNTSNNDTKTQTLVSVLTHQRSKSRWNALRYLCPNGIDPTQFSQITIQLKNNPHLALRFFNWTQSNSICHHTLSSYSTIIHLFARARLYKHAYHTIRTAIRTSQYDDEHCRFDSPPLNLFETLVKTYQGCGSSPFVFDLLIKACLESKKLDPSIEIVRMLLSRGISPKVTTLNSLIFRVCKSRGFDAGYAIYREIFRLDDPKYEISKRGSGFKVNPNVHTYNELMLCCYQDALFEKVGEIWNEMECAPNTYSYTLRMASLCDEGRVEDAEKLWEEMRNKRIEPDVISYNTMMGGFCNIGDVGRAEEFYREMTSGGIESTASTYDHLVKGYCNIGDVDSAVLVYKDMYRKDFCPVPSTIDVVTRLLCDKGRVKEALQLVRNATGKFGLVPKGNSYETLIKGLCAEGRMEEAFKIQAEMVGKGFHPNSKIYAAFIDGHVRQGNEELAGALRKEMLQTQIQS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0159 489 Gene3D Tetratricopeptide repeat domain 395 489 IPR011990 GO:0005515
Lal2g0159 489 Pfam PPR repeat 351 380 IPR002885 -
Lal2g0159 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 163 197 IPR002885 -
Lal2g0159 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 420 454 IPR002885 -
Lal2g0159 489 Pfam PPR repeat family 278 327 IPR002885 -
Lal2g0159 489 Pfam PPR repeat family 423 466 IPR002885 -
Lal2g0159 489 Gene3D Tetratricopeptide repeat domain 233 394 IPR011990 GO:0005515
Lal2g0159 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 279 313 IPR002885 -
Lal2g0159 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 314 348 IPR002885 -
Lal2g0159 489 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 21 487 - -
Lal2g0159 489 TIGRFAM PPR: pentatricopeptide repeat domain 423 455 IPR002885 -
Lal2g0159 489 TIGRFAM PPR: pentatricopeptide repeat domain 316 347 IPR002885 -
Lal2g0159 489 TIGRFAM PPR: pentatricopeptide repeat domain 281 315 IPR002885 -
Lal2g0159 489 TIGRFAM PPR: pentatricopeptide repeat domain 352 383 IPR002885 -
Lal2g0159 489 Gene3D Tetratricopeptide repeat domain 75 229 IPR011990 GO:0005515
Lal2g0159 489 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 21 487 - -
Lal2g0159 489 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0159 75 488 Glycosyltransferase AT1G05670 26.859 2.05e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0159 - - lang:109352821 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0159 2 966934 968403 Lal2g0159 2 966934 968403 ECH