LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g0135	ATGGAGTCTGCTTGTGTGACTCTGAAAACCAATACCCATTTTACAAAGTCAAGAAAAGGCAATACTTTTGGTCATGATAATGGCTTTTTAGGTGAAAGAGTCAAAGGAGTCTTTAACCATAGTCCCTGGGTTAATAATCAAGTTGCAACAAGTTTGAGAACGCAGGAGAGGGTGAATAAGGCCAAACCTGGTGTCGTATCTGCTGTTCTTGCATCAAATAATGCCAAAGAATCTGTGGCCTTTCAAGTGCCAAACTTTTTGAGAAGAAAGGCTGACCCAAAAAATGTTGTTTCCATCATATTGGGAGGGGGTCCTGGGACTCAACTCTTTCCTCTTACCAAACGAGCTGCCACACCTGCTGTGAGTATTGTGGTCCCACTTGGTGGATGTTACAGGCTTATAGATATCCCAATGAGCAACTGCATCAATAGTTGCATTAACAAAATATTTGTACTGACTCAGTTCAATTCTGCATCTCTGAACCGTCACATATCCCGCACTTATTTTGGCAATGGCATCAACTTTGGGGATGGATGTGTAGAGGTTCTGGCAGCTACTCAAACACCAGGAGAAGCTGGAAAGAATTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAGCACACAAATGTTGAGAATGTATTGATTCTGGCTGGAGATCATCTATACCGAATGGATTACATGGACCTTGTGCAGAGCCATGTTGACAGAAATGCAGATATCACAGTATCATGTGCTGCTGTAGGTGACAGCCGTGCATCAGATTATGGATTGGTCGATGTAGATGCAAGAGGTCGCATCATCAATTTTTCAGAGAAACCTAAGGGTGCCGATCTTAAAGCAATGCAAGTAGATACCTCTCTTTTCGGATTGTCACCCCAAGATGCATTGAAGTCACCGTATATTGCGTCTATGGGGGTTTATGTATTCAAGACAGAAATTTTACTGAATCTTCTGAAATGGAGGTATCCTACATGCAATGACTTTGGATCTGAAATCATTCCGGCAGCTGTTGGGGAACACAATGTCCAAGCATATTTTTTCAGAGATTACTGGGAAGACATTGGAACAATAAAGTCCTTTTATGATGCTAACTTGGCTCTTACTGAAGAGAATCCAATGTTCAAATTTTATGATCCCAAGACACCCATTTTCACATCTCCAAGATTCCTACCACCAACAAAGATTGATAAATGTCGGATTGTGGATGCAATAATCTCCCATGGATGTTTCCTGCGAGAATGTTCTGTCCAACATTCTATTGTCGGTGAACGCTCTCGTTTGGATTATGGCGTCGAGATTCAGGACACTGTAATGATGGGAGCAGACTATTACCAAACTGAACCCGAAATTGCTTCTCTGCTAGCAGAGGGGAAGGTTCCCATTGGGATTGGACGTAACACCAAAATCAAGAACTCCATAATTGACAAGAATGCTAGGATTGGGAAAGATGTCATCATAATGAACAAAGATGTGAGCATGTCTACCCCTTCTCATCTTGGTGTTCAAGAAGCAGATAGACCAGATGATGGATTTTACATTCGATCAGGAATTACCATCATAATGGAGAAGGCAACTATAGAAGATGGCACTGTCATATAA	1626	0.4188	MESACVTLKTNTHFTKSRKGNTFGHDNGFLGERVKGVFNHSPWVNNQVATSLRTQERVNKAKPGVVSAVLASNNAKESVAFQVPNFLRRKADPKNVVSIILGGGPGTQLFPLTKRAATPAVSIVVPLGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHISRTYFGNGINFGDGCVEVLAATQTPGEAGKNWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGDSRASDYGLVDVDARGRIINFSEKPKGADLKAMQVDTSLFGLSPQDALKSPYIASMGVYVFKTEILLNLLKWRYPTCNDFGSEIIPAAVGEHNVQAYFFRDYWEDIGTIKSFYDANLALTEENPMFKFYDPKTPIFTSPRFLPPTKIDKCRIVDAIISHGCFLRECSVQHSIVGERSRLDYGVEIQDTVMMGADYYQTEPEIASLLAEGKVPIGIGRNTKIKNSIIDKNARIGKDVIIMNKDVSMSTPSHLGVQEADRPDDGFYIRSGITIIMEKATIEDGTVI	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g0135	541	CDD	LbH_G1P_AT_C	400	535	-	-
	Lal2g0135	541	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	541	IPR011831	GO:0005978\|GO:0008878
	Lal2g0135	541	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	1	541	-	-
	Lal2g0135	541	CDD	ADP_Glucose_PP	99	363	-	-
	Lal2g0135	541	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	94	493	IPR029044	-
	Lal2g0135	541	SUPERFAMILY	Trimeric LpxA-like enzymes	394	541	IPR011004	-
	Lal2g0135	541	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	96	496	IPR011831	GO:0005978\|GO:0008878
	Lal2g0135	541	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	102	121	IPR005836	GO:0005978\|GO:0008878
	Lal2g0135	541	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	311	321	IPR005836	GO:0005978\|GO:0008878
	Lal2g0135	541	Pfam	Nucleotidyl transferase	98	378	IPR005835	GO:0009058\|GO:0016779
	Lal2g0135	541	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	196	204	IPR005836	GO:0005978\|GO:0008878
	Lal2g0135	541	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	82	397	IPR029044	-
	Lal2g0135	541	Gene3D	Hexapeptide repeat proteins	398	541	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g0135	Lal-Chr2	819873	828711	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g0135	K00975		-	gmx:100808791	948.347

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal2g0135	2	819873	828711	Lal9g0155	9	973190	982726	LSH