Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0119 ATGAAGCTATCAAAATTGTACCATCTTCCAATGCTTCTCATCTTCCTTATTATTGGTTATGGAAGTTGCCATGACTACCAAGACGCATTATCAAAGGCCATACTCTTCTTTGAGGGACAGCGTTCGGGGTTCTTGCCACAAGACCAGAGAATGAGTTGGCGTGCCAATTCAGGTCTCAGTGATGGGTGGAGCTACAACACAGACCTCACCGGCGGCTACTACGATGCCGGAGATAACATCAAATTCGGGTTTCCGATGGCTTTTACGACAACAATGCTGGCGTGGAGTGTGCTTGAATTCGGAGACATGATGCCACCCAATGACCTTAGAAACGCATTGGTAGCAATACGTTGGGCCACCGATTATTTGGTCAAGACTGTTTCTCAGCCCAACCGTATTTTCGTTCAGGTGGGTGATCCAAGCTCAGACCATGATTGTTGGGAGAGGCCAGAGGACATGGACACAAGCAGGACAGCATATGCTGTTGATGCACCAAATGCCGCTTCCGATGTCGCTGCTGAAACAGCCGCTGCACTAGCAGCCTCATCCATGGCATTCAGGTCATCGGACCCGGGTTATTCGGAGACATTGCTACGAAATGCTCTTAATGCATTTCAATTTGCAGATAGCTACAGGGGTGCTTACAGTGATAATGATAATGTTAAGTATGGGGCCTGCCCTTATTATTGTGATTTTGATGGCTATCAGGACGAGTTGTTATGGGGAGCTGCTTGGCTAAGAAGGGCTACTCAAGATGATAATTTCCTCAACTACATTCAAAGCAATGGCAAAACGCTTGGTGCGGACGACAACATCAACGAGTTTGGTTGGGACAATAAGCATGCTGGCCTGAATGTTCTTGTCTCTAAGGAAGTCATAGAAGGAAACATGTACTCTTTGGAATCCTACAAGGACTCAGCACAGAGCTTCATGTGCACACTCATACCTGAATCACCAAGCTCACACATAGAGTACACTCCTGGTGGACTTGTATACAGACCCGGAGGCAGCAACTTACAGCATGCAACCTCAATAGCTTTCCTTGAGTTGGTATATGCCAATTACTTAACTCACACATCACAAGATCTCAACTGTGGGAACGTCTATGTTAGTGCACAAACACTTCGCCAACAAGCTAAGAGGCAAGTTGATTACATTTTGGGTGATAATCCAATGGGGTTGTCTTATATGGTTGGCTATAGCGGCTATTATCCGCAACGCATTCATCATCGTGGGTCATCTTTACCTTCCATAAAGGATAATCCTCAGTTTATTGGGTGCAAAGAAGGTTCGATGTATTACAACTCAACGAATCCCAACCTCAATGTACTCGTGGGAGCCATTGTTGGAGGACCTGGAGAAAATGATGATTATGTGGATGATCGAGTTGATTTCATGAAATCAGAGCCAACTACTTACATTAATGCACCTTTTGTTGGGGTTCTAGCATATTTTGCTGCTAATCCCAACTTTACTTGA 1479 0.4523 MKLSKLYHLPMLLIFLIIGYGSCHDYQDALSKAILFFEGQRSGFLPQDQRMSWRANSGLSDGWSYNTDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVLEFGDMMPPNDLRNALVAIRWATDYLVKTVSQPNRIFVQVGDPSSDHDCWERPEDMDTSRTAYAVDAPNAASDVAAETAAALAASSMAFRSSDPGYSETLLRNALNAFQFADSYRGAYSDNDNVKYGACPYYCDFDGYQDELLWGAAWLRRATQDDNFLNYIQSNGKTLGADDNINEFGWDNKHAGLNVLVSKEVIEGNMYSLESYKDSAQSFMCTLIPESPSSHIEYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSQDLNCGNVYVSAQTLRQQAKRQVDYILGDNPMGLSYMVGYSGYYPQRIHHRGSSLPSIKDNPQFIGCKEGSMYYNSTNPNLNVLVGAIVGGPGENDDYVDDRVDFMKSEPTTYINAPFVGVLAYFAANPNFT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0119 492 Gene3D - 23 488 IPR012341 GO:0005975
Lal2g0119 492 PANTHER ENDO-1,4-BETA-GLUCANASE 12 491 - -
Lal2g0119 492 SUPERFAMILY Six-hairpin glycosidases 11 487 IPR008928 GO:0005975
Lal2g0119 492 Pfam Glycosyl hydrolase family 9 26 482 IPR001701 GO:0004553|GO:0005975
Lal2g0119 492 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Lal2g0119 492 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 458 476 IPR033126 -
Lal2g0119 492 PANTHER ENDOGLUCANASE 24 12 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0119 Lal-Chr2 719062 727430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0119 24 492 Glycoside Hydrolase AT4G39000 59.149 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0119 K01179 - gmx:100101849 897.116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0119 2 719062 727430 Lal2g0119 2 719062 727430 ECH