Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0107 ATGGGTTTCCATTTACCTGGTCTTCAAAGGTGCACACATGTTGGTAAGGGTTATCTTGCAGTATATGTTGGAGAAATCCAAAAGAAGGGCTTTGTGATTCCAATATCACACTTCAACCCACTACCAATTCAAGAACTGCTTAGTCAAGAAGAAGAAGAATTTGGATTTCATCATCCAATGGGTGGCCTCACTATCCCTTGTGAACAAGATGTCTTCCTTCATATCACTTCTTGCTTGCATAGTCTTTCCAATAGAATCAAAGAACAGCAGCATCAATATGATCTTGAACTCAAGAATTCCAAGAATCACATGAAGACTGGTGGTAACAGGATAGCCCATGCCACACAGAAACTTCAGAGAAGTCTTTCACAAAGGATAAGAATGGCTTCAGCCATTGTTAATGTTCCAAAAGGCCACTTGGCTGTGTATGTTGGAGAGAACCATAAGAGGTTTGTGATTCCAATATCTTACTTGAATCACCCTTTATTCAAAGATTTGTTAGATTGGGCTGAAGAAGAATTTGGATTCAATCATCCAATGGGAGGTCTCACAATCCCATGCAATGAAAATTACTTCATTACTCTAACTTCTTCTCTTACTCAATAA 606 0.3878 MGFHLPGLQRCTHVGKGYLAVYVGEIQKKGFVIPISHFNPLPIQELLSQEEEEFGFHHPMGGLTIPCEQDVFLHITSCLHSLSNRIKEQQHQYDLELKNSKNHMKTGGNRIAHATQKLQRSLSQRIRMASAIVNVPKGHLAVYVGENHKRFVIPISYLNHPLFKDLLDWAEEEFGFNHPMGGLTIPCNENYFITLTSSLTQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0107 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 107 200 IPR003676 GO:0009733
Lal2g0107 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 80 IPR003676 GO:0009733
Lal2g0107 201 Pfam Auxin responsive protein 14 79 IPR003676 GO:0009733
Lal2g0107 201 Pfam Auxin responsive protein 124 198 IPR003676 GO:0009733
Lal2g0107 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 107 200 - -
Lal2g0107 201 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 12 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0107 Lal-Chr2 660969 664212 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0107 13 81 Calmodulin-binding Proteins AT5G20810 43.478 5.44e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0107 - K14488 peu:105134501 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0107 2 660969 664212 Lal2g0107 2 660969 664212 ECH